[ 源代码： ampliconnoise ]
软件包：ampliconnoise（1.29-8）
removal of noise from 454 sequenced PCR amplicons
AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:
Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences
Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.
其他与 ampliconnoise 有关的软件包
|
|
|
|
-
- dep: libc6 (>= 2.14) [amd64]
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
- dep: libc6 (>= 2.17) [arm64]
- dep: libc6 (>= 2.4) [armhf, i386]
-
- dep: libgsl23 (>= 2.5)
- GNU Scientific Library (GSL) -- library package
-
- dep: libgslcblas0 (>= 2.4)
- GNU Scientific Library (GSL) -- blas library package
-
- dep: libopenmpi3
- high performance message passing library -- shared library
-
- dep: mafft
- Multiple alignment program for amino acid or nucleotide sequences
-
- rec: openmpi-bin
- high performance message passing library -- binaries