[ 源代码: r-bioc-demixt ]
软件包:r-bioc-demixt(1.6.0-1)
Cell type-specific deconvolution of heterogeneous tumor samples
When studying cancer cells from tumors excised from patients, the samples will be a mixture of tumors and healthy cells, e.g. from invading immune cells. For comparing samples, the interest may be more on comparing the transcriptome of the tumors themselves.
This package prepares the statistical separation (deconvolution) of RNAseq or microarray generated expression data for two or three components.
其他与 r-bioc-demixt 有关的软件包
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- dep: libc6 (>= 2.29)
- GNU C 语言运行库:共享库
同时作为一个虚包由这些包填实: libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC 支持库
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- dep: libgomp1 (>= 4.9)
- GCC OpenMP(GOMP)支持库
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- dep: libstdc++6 (>= 5.2)
- GNU 标准 C++ 库,第3版
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- dep: r-api-4.0
- 本虚包由这些包填实: r-base-core
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- dep: r-api-bioc-3.12
- 本虚包由这些包填实: r-bioc-biocgenerics
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- dep: r-base-core (>= 4.0.3-1)
- GNU R core of statistical computation and graphics system
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- dep: r-bioc-summarizedexperiment
- BioConductor assay container
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- dep: r-cran-base64enc
- GNU R package that provides tools for base64 encoding
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- dep: r-cran-ggplot2
- implementation of the Grammar of Graphics
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- dep: r-cran-kernsmooth
- GNU R package for kernel smoothing and density estimation
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- dep: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
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- dep: r-cran-matrixcalc
- GNU R functions for matrix calculations -- matrixcalc
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- dep: r-cran-matrixstats
- GNU R methods that apply to rows and columns of a matrix
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- dep: r-cran-rcpp (>= 1.0.0)
- GNU R package for Seamless R and C++ Integration
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- dep: r-cran-truncdist
- GNU R functions for truncated random variables
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- rec: r-cran-rmarkdown
- convert R markdown documents into a variety of formats