[ 源代码： bio-vcf ]
软件包：bio-vcf（0.9.5-2）
domain specific language (DSL) for processing the VCF format
Bio-vcf provides a domain specific language (DSL) for processing the VCF format. Record named fields can be queried with regular expressions, e.g.
sample.dp>20 and rec.filter !~ /LowQD/ and rec.tumor.bcount[rec.alt]>4
Bio-vcf is a new generation VCF parser, filter and converter. Bio-vcf is not only very fast for genome-wide (WGS) data, it also comes with a really nice filtering, evaluation and rewrite language and it can output any type of textual data, including VCF header and contents in RDF and JSON.
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- dep: ruby
- Interpreter of object-oriented scripting language Ruby (default version)
- 或者 ruby-interpreter
- 软件包暂时不可用