软件包：samtools（1.11-1）

samtools 的相关链接

Debian 的资源：

下载源码包 samtools：

维护小组：

外部的资源：

主页 [www.htslib.org]

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processing sequence alignments in SAM, BAM and CRAM formats

Samtools is a set of utilities that manipulate nucleotide sequence alignments in the binary BAM format. It imports from and exports to the ascii SAM (Sequence Alignment/Map) and CRAM formats, does sorting, merging and indexing, and allows one to retrieve reads in any regions swiftly. It is designed to work on a stream, and is able to open a BAM or CRAM (not SAM) file on a remote FTP or HTTP server.

标签: 领域: 生物学, 生物信息学, 实做语言: implemented-in::c, interface::commandline, 网络: 客户端, 网络协议: FTP, protocol::http, role::program, 范围: 实用程序, 界面工具箱: Ncurses TUI, Purpose: use::analysing, use::calculating, Filtering, 处理: Biological Sequence

其他与 samtools 有关的软件包

依赖

推荐

建议

增强

dep: libc6 (>= 2.29)

GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
dep: libhts3 (>= 1.11)

C library for high-throughput sequencing data formats
dep: libncurses6 (>= 6)

终端控制的共享库
dep: libtinfo6 (>= 6)

用于终端处理的共享底层 terminfo 库
dep: zlib1g (>= 1:1.1.4)

压缩库 - 运行时

sug: cwltool

Common Workflow Language reference implementation

下载 samtools

下载可用于所有硬件架构的
硬件架构	软件包大小	安装后大小	文件
amd64	531.8 kB	1,201.0 kB	[文件列表]