[ 源代码： r-bioc-tfbstools ]
软件包：r-bioc-tfbstools（1.36.0+dfsg-2）
r-bioc-tfbstools 的相关链接
Debian 的资源：
下载源码包 r-bioc-tfbstools：
- [r-bioc-tfbstools_1.36.0+dfsg-2.dsc]
- [r-bioc-tfbstools_1.36.0+dfsg.orig.tar.xz]
- [r-bioc-tfbstools_1.36.0+dfsg-2.debian.tar.xz]
维护小组：
外部的资源：
- 主页 [bioconductor.org]
相似软件包：
GNU R Transcription Factor Binding Site (TFBS) Analysis
TFBSTools is a package for the analysis and manipulation of transcription factor binding sites. It includes matrices conversion between Position Frequency Matirx (PFM), Position Weight Matirx (PWM) and Information Content Matrix (ICM). It can also scan putative TFBS from sequence/alignment, query JASPAR database and provides a wrapper of de novo motif discovery software.
其他与 r-bioc-tfbstools 有关的软件包
|
|
|
|
-
- dep: libc6 (>= 2.4)
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
-
- dep: r-api-4.0
- 本虚包由这些包填实： r-base-core
-
- dep: r-api-bioc-3.16
- 本虚包由这些包填实： r-bioc-biocgenerics
-
- dep: r-base-core (>= 4.2.2.20221110-1)
- GNU R core of statistical computation and graphics system
-
- dep: r-bioc-biobase (>= 2.28)
- base functions for Bioconductor
-
- dep: r-bioc-biocgenerics (>= 0.14.0)
- generic functions for Bioconductor
-
- dep: r-bioc-biocparallel (>= 1.2.21)
- BioConductor facilities for parallel evaluation
-
- dep: r-bioc-biostrings (>= 2.36.4)
- GNU R string objects representing biological sequences
-
- dep: r-bioc-bsgenome (>= 1.36.3)
- BioConductor infrastructure for Biostrings-based genome data packages
-
- dep: r-bioc-cner (>= 1.4.0)
- CNE Detection and Visualization
-
- dep: r-bioc-dirichletmultinomial (>= 1.10.0)
- Dirichlet-Multinomial Mixture Model Machine Learning for Microbiome Data
-
- dep: r-bioc-genomeinfodb (>= 1.6.1)
- BioConductor utilities for manipulating chromosome identifiers
-
- dep: r-bioc-genomicranges (>= 1.20.6)
- BioConductor representation and manipulation of genomic intervals
-
- dep: r-bioc-iranges (>= 2.2.7)
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-rtracklayer (>= 1.28.10)
- GNU R interface to genome browsers and their annotation tracks
-
- dep: r-bioc-s4vectors (>= 0.9.25)
- BioConductor S4 implementation of vectors and lists
-
- dep: r-bioc-seqlogo (>= 1.34.0)
- GNU R sequence logos for DNA sequence alignments
-
- dep: r-bioc-xvector (>= 0.8.0)
- BioConductor representation and manpulation of external sequences
-
- dep: r-cran-catools (>= 1.17.1)
- GNU R package providing various utility functions
-
- dep: r-cran-dbi (>= 0.6)
- GNU R package providing a generic database interface
-
- dep: r-cran-gtools (>= 3.5.0)
- GNU R package with R programming tools by Greg Warnes et al
-
- dep: r-cran-rsqlite (>= 1.0.0)
- Database Interface R driver for SQLite
-
- dep: r-cran-tfmpvalue (>= 0.0.5)
- GNU R P-Value Computation for Position Weight Matrices
-
- dep: r-cran-xml (>= 3.98-1.3)
- GNU R package for XML parsing and generation
-
- sug: r-bioc-biocstyle (>= 1.7.7)
- standard styles for vignettes and other Bioconductor documents
-
- sug: r-cran-knitr (>= 1.11)
- GNU R package for dynamic report generation using Literate Programming
-
- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
-
- sug: r-cran-testthat
- GNU R testsuite