[ Source: ugene ]
Пакунок: ugene (51.0+dfsg-2)
Links for ugene
Debian Resources:
Download Source Package ugene:
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Steffen Moeller (QA Page)
- Andreas Tille (QA Page)
- Olivier Sallou (QA Page)
- Pierre Gruet (QA Page)
External Resources:
- Homepage [ugene.unipro.ru]
Similar packages:
integrated bioinformatics toolkit
Unipro UGENE is a cross-platform visual environment for DNA and protein sequence analysis. UGENE integrates the most important bioinformatics computational algorithms and provides an easy-to-use GUI for performing complex analysis of the genomic data. One of the main features of UGENE is a designer for custom bioinformatics workflows.
Інші пакунки пов'язані з ugene
|
|
|
|
-
- dep: libc6 (>= 2.38)
- Бібліотека GNU C: спільні бібліотеки
also a virtual package provided by libc6-udeb
-
- dep: libgcc-s1 (>= 3.0)
- Допоміжна бібліотека GCC
-
- dep: libgl1
- Vendor neutral GL dispatch library -- legacy GL support
-
- dep: libglu1-mesa
- Допоміжна бібліотека Mesa OpenGL (GLU)
- or libglu1
- virtual package provided by libglu1-mesa
-
- dep: libqt5core5t64 (>= 5.15.1)
- Qt 5 — стрижневий модуль
-
- dep: libqt5gui5t64 (>= 5.14.1)
- Qt 5 — модуль ГІК
- or libqt5gui5-gles (>= 5.14.1)
- Qt 5 GUI module — OpenGL ES variant
-
- dep: libqt5network5t64 (>= 5.15.1)
- Qt 5 — мережевий модуль
-
- dep: libqt5networkauth5 (>= 5.11.2)
- online account access for Qt apps - Library
-
- dep: libqt5printsupport5t64 (>= 5.0.2)
- Qt 5 print support module
-
- dep: libqt5script5 (>= 5.6.0~beta)
- Qt 5 — модуль сценаріїв
-
- dep: libqt5scripttools5 (>= 5.6.0~beta)
- Qt 5 script tools module
-
- dep: libqt5svg5 (>= 5.6.0~beta)
- Qt 5 — модуль SVG
-
- dep: libqt5test5t64 (>= 5.6.0~beta)
- Qt 5 — модуль тестування
-
- dep: libqt5websockets5 (>= 5.6.0)
- Qt 5 Web Sockets module
-
- dep: libqt5widgets5t64 (>= 5.15.1)
- Qt 5 widgets module
-
- dep: libqt5xml5t64 (>= 5.1.0)
- Qt 5 — модуль XML
-
- dep: libsqlite3-0 (>= 3.7.11)
- Колективна бібліотека SQLite 3
-
- dep: libstdc++6 (>= 14)
- Стандартна бібліотека C++ GNU, версії 3
-
- dep: libx11-6
- Клієнтська бібліотека X11
-
- dep: libxtst6
- Тестування X11 — бібліотека розширення Record
-
- dep: ugene-data
- required data for UGENE - integrated bioinformatics toolkit
-
- dep: zlib1g (>= 1:1.2.3.3)
- Бібліотека стискання даних (виконавчий модуль)
-
- rec: bedtools
- suite of utilities for comparing genomic features
-
- rec: bowtie
- Ultrafast memory-efficient short read aligner
-
- rec: bowtie2
- ultrafast memory-efficient short read aligner
-
- rec: bwa
- Burrows-Wheeler Aligner
-
- rec: clark
- Пакунок недоступний
-
- rec: clustalo
- General-purpose multiple sequence alignment program for proteins
-
- rec: clustalw
- global multiple nucleotide or peptide sequence alignment
-
- rec: cutadapt
- Clean biological sequences from high-throughput sequencing reads
-
- rec: default-jre-headless
- Standard Java or Java compatible Runtime (headless)
-
- rec: fastqc
- quality control for high throughput sequence data
-
- rec: hisat2
- graph-based alignment of short nucleotide reads to many genomes
-
- rec: hmmer
- profile hidden Markov models for protein sequence analysis
-
- rec: hmmer2
- profile hidden Markov models for protein sequence analysis
-
- rec: kalign
- Global and progressive multiple sequence alignment
-
- rec: kraken
- assigning taxonomic labels to short DNA sequences
-
- rec: macs
- Model-based Analysis of ChIP-Seq on short reads sequencers
-
- rec: mafft
- Multiple alignment program for amino acid or nucleotide sequences
-
- rec: metaphlan2
- virtual package provided by metaphlan
-
- rec: mrbayes
- Bayesian Inference of Phylogeny
-
- rec: muscle
- Multiple alignment program of protein sequences
-
- rec: ncbi-blast+
- next generation suite of BLAST sequence search tools
-
- rec: phyml
- Phylogenetic estimation using Maximum Likelihood
-
- rec: primer3
- tool to design flanking oligo nucleotides for DNA amplification
-
- rec: r-base
- GNU R — система для статистичних обчислень та представлення даних в графічному вигляді
-
- rec: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
-
- rec: spades
- genome assembler for single-cell and isolates data sets
-
- rec: t-coffee
- Multiple Sequence Alignment
-
- rec: trimmomatic
- flexible read trimming tool for Illumina NGS data
-
- rec: vcftools
- Collection of tools to work with VCF files
-
- rec: wevote
- Пакунок недоступний
-
- sug: cufflinks
- Transcript assembly, differential expression and regulation for RNA-Seq
Завантажити ugene
| Архітектура | Розмір пакунка | Розмір після встановлення | Файли |
|---|---|---|---|
| arm64 | 20,126.2 kB | 88,511.0 kB | [список файлів] |