[ Source: r-bioc-tximeta ]
Пакунок: r-bioc-tximeta (1.22.1+dfsg-1)
Links for r-bioc-tximeta
Debian Resources:
Download Source Package r-bioc-tximeta:
- [r-bioc-tximeta_1.22.1+dfsg-1.dsc]
- [r-bioc-tximeta_1.22.1+dfsg.orig.tar.xz]
- [r-bioc-tximeta_1.22.1+dfsg-1.debian.tar.xz]
Maintainers:
External Resources:
- Homepage [bioconductor.org]
Similar packages:
Transcript Quantification Import with Automatic Metadata
Transcript quantification import from Salmon and alevin with automatic attachment of transcript ranges and release information, and other associated metadata. De novo transcriptomes can be linked to the appropriate sources with linkedTxomes and shared for computational reproducibility.
Інші пакунки пов'язані з r-bioc-tximeta
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- dep: r-api-4.0
- virtual package provided by r-base-core
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- dep: r-api-bioc-3.19
- virtual package provided by r-bioc-biocgenerics
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- dep: r-bioc-annotationdbi (>= 1.66.0)
- GNU R Annotation Database Interface for BioConductor
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- dep: r-bioc-annotationhub (>= 3.12.0)
- GNU R client to access AnnotationHub resources
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- dep: r-bioc-biocfilecache (>= 2.12.0)
- GNU R management of files across sessions
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- dep: r-bioc-biostrings (>= 2.72.1)
- GNU R string objects representing biological sequences
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- dep: r-bioc-ensembldb (>= 2.28.0)
- GNU R utilities to create and use an Ensembl based annotation database
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- dep: r-bioc-genomeinfodb (>= 1.40.1)
- BioConductor utilities for manipulating chromosome identifiers
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- dep: r-bioc-genomicfeatures (>= 1.56.0)
- GNU R tools for making and manipulating transcript centric annotations
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- dep: r-bioc-genomicranges (>= 1.56.1)
- BioConductor representation and manipulation of genomic intervals
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- dep: r-bioc-iranges (>= 2.38.1)
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-s4vectors (>= 0.42.1)
- BioConductor S4 implementation of vectors and lists
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- dep: r-bioc-summarizedexperiment (>= 1.34.0)
- BioConductor assay container
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- dep: r-bioc-txdbmaker
- Tools for making TxDb objects from genomic annotations
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- dep: r-bioc-tximport (>= 1.32.0)
- transcript-level estimates for biological sequencing
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- dep: r-cran-jsonlite
- Robust, High Performance JSON Parser and Generator for R
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- dep: r-cran-matrix
- GNU R package of classes for dense and sparse matrices
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- dep: r-cran-tibble
- GNU R Simple Data Frames
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- sug: r-bioc-deseq2 (>= 1.44.0)
- R package for RNA-Seq Differential Expression Analysis
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- sug: r-bioc-edger (>= 4.2.0)
- Empirical analysis of digital gene expression data in R
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- sug: r-bioc-fishpond (>= 2.10.0)
- Differential transcript and gene expression with inferential replicates
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- sug: r-bioc-limma (>= 3.60.3)
- linear models for microarray data
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- sug: r-bioc-tximportdata (>= 1.32.0)
- GNU R various transcript abundance quantifiers
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- sug: r-cran-devtools
- Tools to Make Developing R Packages Easier
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- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
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- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
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- sug: r-cran-testthat
- GNU R testsuite
Завантажити r-bioc-tximeta
| Архітектура | Розмір пакунка | Розмір після встановлення | Файли |
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| all | 525.8 kB | 728.0 kB | [список файлів] |