File list of package bcbio in sid of architecture all
/usr/bin/bcbio_fastq_umi_prep.py /usr/bin/bcbio_nextgen.py /usr/bin/bcbio_prepare_samples.py /usr/bin/bcbio_setup_genome.py /usr/bin/cwltool2wdl.py /usr/share/bcbio/config/bcbio_sample.yaml /usr/share/bcbio/config/bcbio_system.yaml /usr/share/bcbio/config/examples/HCC2218-sv-getdata.sh /usr/share/bcbio/config/examples/HCC2218-sv.yaml /usr/share/bcbio/config/examples/NA12878-ensemble.yaml /usr/share/bcbio/config/examples/NA12878-exome-methodcmp-getdata.sh /usr/share/bcbio/config/examples/NA12878-exome-methodcmp.yaml /usr/share/bcbio/config/examples/NA12878-hg38-validate-getdata.sh /usr/share/bcbio/config/examples/NA12878-hg38-validate.yaml /usr/share/bcbio/config/examples/NA12878-illumina.yaml /usr/share/bcbio/config/examples/NA12878-sv-getdata.sh /usr/share/bcbio/config/examples/NA12878-sv.yaml /usr/share/bcbio/config/examples/NA12878-trio-wgs-joint.yaml /usr/share/bcbio/config/examples/NA12878-trio-wgs-validate-getdata.sh /usr/share/bcbio/config/examples/NA12878-trio-wgs-validate.yaml /usr/share/bcbio/config/examples/NA12878.validate.sh /usr/share/bcbio/config/examples/NA24385-10x-getdata.sh /usr/share/bcbio/config/examples/NA24385-10x.yaml /usr/share/bcbio/config/examples/archived/NA12878-trio-sv-getdata.sh /usr/share/bcbio/config/examples/archived/NA12878-trio-sv.yaml /usr/share/bcbio/config/examples/cancer-dream-syn3-getdata.sh /usr/share/bcbio/config/examples/cancer-dream-syn3.yaml /usr/share/bcbio/config/examples/cancer-dream-syn4.yaml /usr/share/bcbio/config/examples/cancer-giab-na12878-na24385-getdata.sh /usr/share/bcbio/config/examples/cancer-giab-na12878-na24385.yaml /usr/share/bcbio/config/examples/chip_seq.yaml /usr/share/bcbio/config/examples/giab-validate-setup.sh /usr/share/bcbio/config/examples/giab-validate.yaml /usr/share/bcbio/config/examples/mitochondrial_variants_amplicons.yaml /usr/share/bcbio/config/examples/rnaseq-seqc-getdata.sh /usr/share/bcbio/config/examples/rnaseq-seqc.yaml /usr/share/bcbio/config/examples/rnaseq.variant_calling.yaml /usr/share/bcbio/config/examples/seqc.csv /usr/share/bcbio/config/examples/somatic_tumor_normal_gatkcnv.yaml /usr/share/bcbio/config/galaxy/bcbio/variant.xml /usr/share/bcbio/config/genomes/BDGP6-resources.yaml /usr/share/bcbio/config/genomes/GRCh37-resources.yaml /usr/share/bcbio/config/genomes/GRCz10-resources.yaml /usr/share/bcbio/config/genomes/GRCz11-resources.yaml /usr/share/bcbio/config/genomes/Sscrofa11.1-resources.yaml /usr/share/bcbio/config/genomes/TAIR10-resources.yaml /usr/share/bcbio/config/genomes/WBcel235-resources.yaml /usr/share/bcbio/config/genomes/canFam3-resources.yaml /usr/share/bcbio/config/genomes/dm3-resources.yaml /usr/share/bcbio/config/genomes/galGal4-resources.yaml /usr/share/bcbio/config/genomes/hg19-resources.yaml /usr/share/bcbio/config/genomes/hg38-noalt-resources.yaml /usr/share/bcbio/config/genomes/hg38-resources.yaml /usr/share/bcbio/config/genomes/mm10-resources.yaml /usr/share/bcbio/config/genomes/mm9-resources.yaml /usr/share/bcbio/config/genomes/phix-resources.yaml /usr/share/bcbio/config/genomes/pseudomonas_aeruginosa_ucbpp_pa14-resources.yaml /usr/share/bcbio/config/genomes/rn5-resources.yaml /usr/share/bcbio/config/genomes/rn6-resources.yaml /usr/share/bcbio/config/genomes/sacCer3-resources.yaml /usr/share/bcbio/config/genomes/xenTro3-resources.yaml /usr/share/bcbio/config/teaching/cancer-syn3-chr6-prep.sh /usr/share/bcbio/config/teaching/cancer-syn3-chr6.yaml /usr/share/bcbio/config/templates/bisulfite_seq.yaml /usr/share/bcbio/config/templates/freebayes-variant.yaml /usr/share/bcbio/config/templates/gatk-joint-genotyping.yaml /usr/share/bcbio/config/templates/gatk-variant.yaml /usr/share/bcbio/config/templates/illumina-chipseq.yaml /usr/share/bcbio/config/templates/illumina-fastrnaseq.yaml /usr/share/bcbio/config/templates/illumina-rnaseq.yaml /usr/share/bcbio/config/templates/illumina-srnaseq.yaml /usr/share/bcbio/config/templates/indrop-singlecell.yaml /usr/share/bcbio/config/templates/noalign-variant.yaml /usr/share/bcbio/config/templates/purecn_pon.yaml /usr/share/bcbio/config/templates/purecn_ton.yaml /usr/share/bcbio/config/templates/somatic-duplex-umi.yaml /usr/share/bcbio/config/templates/somatic-single-umi.yaml /usr/share/bcbio/config/templates/somatic_tumor_only.yaml /usr/share/bcbio/config/templates/tumor-paired.yaml /usr/share/bcbio/config/transfer_info.yaml /usr/share/bcbio/config/vcfanno/GRCh37-dbnsfp.conf /usr/share/bcbio/config/vcfanno/GRCh37-dbscsnv.conf /usr/share/bcbio/config/vcfanno/GRCh37-gemini.conf /usr/share/bcbio/config/vcfanno/GRCh37-gemini.lua /usr/share/bcbio/config/vcfanno/GRCh37-gnomad_genome.conf /usr/share/bcbio/config/vcfanno/hg38-dbnsfp.conf /usr/share/bcbio/config/vcfanno/hg38-dbscsnv.conf /usr/share/bcbio/config/vcfanno/hg38-gemini.conf /usr/share/bcbio/config/vcfanno/hg38-gemini.lua /usr/share/bcbio/config/vcfanno/hg38-gnomad_genome.conf /usr/share/bcbio/config/vcfanno/mm10-gemini.conf /usr/share/bcbio/config/vcfanno/rnaedit.conf /usr/share/bcbio/config/vcfanno/rnaedit.lua /usr/share/bcbio/config/vcfanno/somatic.conf /usr/share/doc/bcbio/changelog.Debian.gz /usr/share/doc/bcbio/changelog.gz /usr/share/doc/bcbio/copyright /usr/share/lintian/overrides/bcbio /usr/share/man/man1/bcbio_nextgen.1.gz