all options
bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ Source: simka  ]

Пакунок: simkamin (1.5.3-4)

Links for simkamin

Screenshot

Debian Resources:

Download Source Package simka:

Maintainers:

External Resources:

Similar packages:

approximate comparative metagenomics method dedicated to NGS datasets

Simka is a de novo comparative metagenomics tool. Simka represents each dataset as a k-mer spectrum and compute several classical ecological distances between them.

The difference with Simka stands in the fact that SimkaMin outputs approximate (but very similar) results by subsampling the kmer space. With this strategy, and with default parameters, SimkaMin is an order of magnitude faster, uses 10 times less memory and 70 times less disk than Simka.

Інші пакунки пов'язані з simkamin

  • depends
  • recommends
  • suggests
  • enhances

Завантажити simkamin

Завантаження для всіх доступних архітектур
Архітектура Розмір пакунка Розмір після встановлення Файли
all 31.3 kB385.0 kB [список файлів]