[ Source: r-cran-sctransform ]
Package: r-cran-sctransform (0.4.1-1)
Links for r-cran-sctransform
Debian Resources:
Download Source Package r-cran-sctransform:
- [r-cran-sctransform_0.4.1-1.dsc]
- [r-cran-sctransform_0.4.1.orig.tar.gz]
- [r-cran-sctransform_0.4.1-1.debian.tar.xz]
Maintainers:
External Resources:
- Homepage [cran.r-project.org]
Similar packages:
Variance Stabilizing Transformations for Single Cell UMI Data
A normalization method for single-cell UMI count data using a variance stabilizing transformation. The transformation is based on a negative binomial regression model with regularized parameters. As part of the same regression framework, this package also provides functions for batch correction, and data correction. See Hafemeister and Satija 2019 <doi:10.1101/576827> for more details.
Other Packages Related to r-cran-sctransform
|
|
|
|
-
- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- or libblas.so.3
- virtual package provided by libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
-
- dep: libc6 (>= 2.29)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
-
- dep: libgcc-s1 (>= 3.0) [not armel, armhf, ppc64el]
- GCC support library
- dep: libgcc-s1 (>= 3.4.4) [ppc64el]
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
-
- dep: liblapack3
- Library of linear algebra routines 3 - shared version
- or liblapack.so.3
- virtual package provided by liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
-
- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
-
- dep: r-api-4.0
- virtual package provided by r-base-core
-
- dep: r-cran-dplyr
- GNU R grammar of data manipulation
-
- dep: r-cran-future
- R package: A Future API for R
-
- dep: r-cran-future.apply
- apply function to elements in parallel using futures
-
- dep: r-cran-ggplot2
- implementation of the Grammar of Graphics
-
- dep: r-cran-gridextra
- GNU R package with extensions for the grid package
-
- dep: r-cran-magrittr
- GNU R forward-pipe operator
-
- dep: r-cran-mass
- GNU R package of Venables and Ripley's MASS
-
- dep: r-cran-matrix (>= 1.5-0)
- GNU R package of classes for dense and sparse matrices
-
- dep: r-cran-matrixstats
- GNU R methods that apply to rows and columns of a matrix
-
- dep: r-cran-rcpp (>= 0.11.0)
- GNU R package for Seamless R and C++ Integration
-
- dep: r-cran-rcpparmadillo
- GNU R package for Armadillo C++ linear algebra library
-
- dep: r-cran-reshape2
- Flexibly reshape data: a reboot of the reshape package
-
- dep: r-cran-rlang
- Functions for Base Types and Core R and 'Tidyverse' Features
-
- rec: r-cran-irlba
- GNU R fast truncated SVD, PCA and symmetric eigendecomposition
-
- rec: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
-
- rec: r-cran-testthat
- GNU R testsuite
Download r-cran-sctransform
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 487.7 kB | 735.0 kB | [list of files] |
| arm64 | 475.5 kB | 763.0 kB | [list of files] |
| armel | 478.2 kB | 717.0 kB | [list of files] |
| armhf | 477.2 kB | 661.0 kB | [list of files] |
| i386 | 493.9 kB | 753.0 kB | [list of files] |
| mips64el | 473.5 kB | 774.0 kB | [list of files] |
| ppc64el | 484.6 kB | 828.0 kB | [list of files] |
| s390x | 488.1 kB | 751.0 kB | [list of files] |