Paket: r-bioc-genomicalignments (1.38.2-1 ve diğerleri)

r-bioc-genomicalignments için bağlantılar

Debian Kaynakları:

r-bioc-genomicalignments Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [bioconductor.org]

Benzer paketler:

BioConductor representation and manipulation of short genomic alignments

This BioConductor package provides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.

r-bioc-genomicalignments ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libc6 (>= 2.16) [x32]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

dep: libc6 (>= 2.17) [arm64, ppc64el]

dep: libc6 (>= 2.27) [riscv64]

dep: libc6 (>= 2.3) [hppa]

dep: libc6 (>= 2.37) [sh4]

dep: libc6 (>= 2.4) [amd64, m68k, mips64el, ppc64, s390x, sparc64]
dep: libc6.1 (>= 2.37) [ia64]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb

dep: libc6.1 (>= 2.4) [alpha]
dep: r-api-3.4 [m68k]

Paket mevcut değil
dep: r-api-3.5 [sparc64]

Paket mevcut değil
dep: r-api-4.0 [m68k, sparc64 değil]

sanal paketi sağlayan r-base-core
dep: r-api-bioc-3.16 [x32]

Paket mevcut değil
dep: r-api-bioc-3.18 [m68k, sparc64, x32 değil]

sanal paketi sağlayan r-bioc-biocgenerics
dep: r-api-bioc-3.8 [sparc64]

Paket mevcut değil
dep: r-base-core (>= 3.4.3-1) [m68k]

GNU R core of statistical computation and graphics system

dep: r-base-core (>= 3.5.2-1) [sparc64]

dep: r-base-core (>= 4.2.2.20221110-1) [x32]
dep: r-bioc-biocgenerics (>= 0.15.3) [m68k, sparc64]

generic functions for Bioconductor

dep: r-bioc-biocgenerics (>= 0.37.0) [m68k, sparc64 değil]
dep: r-bioc-biocparallel

BioConductor facilities for parallel evaluation
dep: r-bioc-biostrings (>= 2.37.1) [m68k]

GNU R string objects representing biological sequences

dep: r-bioc-biostrings (>= 2.47.6) [sparc64]

dep: r-bioc-biostrings (>= 2.55.7) [m68k, sparc64 değil]
dep: r-bioc-genomeinfodb (>= 1.13.1)

BioConductor utilities for manipulating chromosome identifiers
dep: r-bioc-genomicranges (>= 1.29.14) [m68k]

BioConductor representation and manipulation of genomic intervals

dep: r-bioc-genomicranges (>= 1.33.4) [sparc64]

dep: r-bioc-genomicranges (>= 1.41.5) [m68k, sparc64 değil]
dep: r-bioc-iranges (>= 2.11.16) [m68k]

GNU R low-level containers for storing sets of integer ranges

dep: r-bioc-iranges (>= 2.15.12) [sparc64]

dep: r-bioc-iranges (>= 2.23.9) [m68k, sparc64 değil]
dep: r-bioc-rsamtools (>= 1.21.4) [m68k]

GNU R binary alignment (BAM), variant call (BCF), or tabix file import

dep: r-bioc-rsamtools (>= 1.31.2) [m68k değil]
dep: r-bioc-s4vectors (>= 0.13.13) [m68k]

BioConductor S4 implementation of vectors and lists

dep: r-bioc-s4vectors (>= 0.19.11) [sparc64]

dep: r-bioc-s4vectors (>= 0.27.12) [m68k, sparc64 değil]
dep: r-bioc-summarizedexperiment (>= 1.5.3) [m68k]

BioConductor assay container

dep: r-bioc-summarizedexperiment (>= 1.9.13) [m68k değil]

rec: r-bioc-shortread (>= 1.24.0)

GNU R classes and methods for high-throughput short-read sequencing data
rec: r-cran-runit

GNU R package providing unit testing framework

sug: r-bioc-biocstyle [m68k, sparc64 değil]

standard styles for vignettes and other Bioconductor documents
sug: r-bioc-bsgenome

BioConductor infrastructure for Biostrings-based genome data packages
sug: r-bioc-deseq2 [m68k, sparc64 değil]

R package for RNA-Seq Differential Expression Analysis
sug: r-bioc-edger [sparc64 değil]

Empirical analysis of digital gene expression data in R
sug: r-bioc-genomicfeatures

GNU R tools for making and manipulating transcript centric annotations
sug: r-bioc-rtracklayer

GNU R interface to genome browsers and their annotation tracks
sug: r-bioc-shortread [sparc64 değil]

GNU R classes and methods for high-throughput short-read sequencing data
sug: r-cran-runit [sparc64 değil]

GNU R package providing unit testing framework

r-bioc-genomicalignments indir

Tüm mevcut mimariler için indir
Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
alpha (resmi olmayan port)	1.38.2-1	2.093,2 kB	3.020,0 kB	[dosya listesi]
amd64	1.38.2-1	2.094,1 kB	2.964,0 kB	[dosya listesi]
arm64	1.38.2-1	2.093,6 kB	3.020,0 kB	[dosya listesi]
hppa (resmi olmayan port)	1.38.2-1	2.092,9 kB	2.965,0 kB	[dosya listesi]
ia64 (resmi olmayan port)	1.38.2-1	2.095,1 kB	3.004,0 kB	[dosya listesi]
m68k (resmi olmayan port)	1.14.0-1	1.648,5 kB	2.183,0 kB	[dosya listesi]
mips64el	1.38.2-1	2.090,4 kB	3.026,0 kB	[dosya listesi]
ppc64 (resmi olmayan port)	1.38.2-1	2.096,4 kB	3.021,0 kB	[dosya listesi]
ppc64el	1.38.2-1	2.095,6 kB	3.020,0 kB	[dosya listesi]
riscv64	1.38.2-1	2.094,1 kB	2.952,0 kB	[dosya listesi]
s390x	1.38.2-1	2.093,5 kB	2.964,0 kB	[dosya listesi]
sh4 (resmi olmayan port)	1.38.2-1	2.091,9 kB	2.955,0 kB	[dosya listesi]
sparc64 (resmi olmayan port)	1.18.1-1	2.048,6 kB	2.867,0 kB	[dosya listesi]
x32 (resmi olmayan port)	1.34.0-1	2.063,0 kB	2.904,0 kB	[dosya listesi]