Paket: sepp (4.5.1+really4.5.1+dfsg-6)

Länkar för sepp

Debianresurser:

Hämta källkodspaketet sepp:

Ansvariga:

Debian Med Packaging Team (QA-sida, E-postarkiv)
Andreas Tille (QA-sida)
Pierre Gruet (QA-sida)

Externa resurser:

Hemsida [github.com]

Liknande paket:

phylogeny with ensembles of Hidden Markov Models

The tool SEPP implementing these methods uses ensembles of Hidden Markov Models (HMMs) in different ways, each focusing on a different problem.

SEPP stands for "SATe-enabled Phylogenetic Placement", and addresses the problem of phylogenetic placement of short reads into reference alignments and trees.

Andra paket besläktade med sepp

beror

rekommenderar

föreslår

enhances

dep: default-jre

Standard Java or Java compatible Runtime
dep: hmmer

profile hidden Markov models for protein sequence analysis
dep: libgoogle-gson-java

Converts Java objects into their JSON representation
dep: libjenkins-json-java

Library for transforming Java objects between XML and JSON
dep: libjson-java

library for transforming Java objects and XML to JSON and back again
dep: ncbi-blast+

next generation suite of BLAST sequence search tools
dep: pplacer

phylogenetic placement and downstream analysis
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: python3-dendropy

DendroPy Phylogenetic Computing Library (Python 3)

Hämta sepp

Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	160,9 kbyte	394,0 kbyte	[filförteckning]
arm64	160,9 kbyte	394,0 kbyte	[filförteckning]
ppc64 (inofficiell anpassning)	160,9 kbyte	394,0 kbyte	[filförteckning]