Paket: density-fitness (1.0.12-2)

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Hemsida [github.com]

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Calculates per-residue electron density scores

The program density-fitness calculates electron density metrics, for main- (includes Cβ atom) and side-chain atoms of individual residues.

For this calculation, the program uses the structure model in either PDB or mmCIF format and the electron density from the 2mFo-DFc and mFo-DFc maps. If these maps are not readily available, the MTZ file and model can be used to calculate maps clipper. Density-fitness support both X-ray and electron diffraction data.

This program is essentially a reimplementation of edstats, a program available from the CCP4 suite. However, the output now contains only the RSR, SRSR and RSCC fields as in edstats with the addition of EDIAm and OPIA and no longer requires pre-calculated map coefficients.

Andra paket besläktade med density-fitness

beror

rekommenderar

föreslår

enhances

dep: libc6 (>= 2.38)

GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
dep: libcifpp7 (>= 7.0.7)

Library files for libcifpp
dep: libclipper2 (>= 2.1.20201109)

object oriented library for crystallographic computing
dep: libgcc-s1 (>= 3.0)

GCC stödbibliotek
dep: libpdb-redo3 (>= 3.1.5)

Library file for libpdb-redo
dep: libstdc++6 (>= 13.1)

GNU standardbibliotek v3 för C++
dep: libzeep5.1 (>= 5.1.8)

Library file for libzeep
dep: zlib1g (>= 1:1.2.3.4)

Kompressionsbibliotek - körtidspaket

Hämta density-fitness

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Arkitektur	Paketstorlek	Installerad storlek	Filer
mips64el	480,7 kbyte	5.918,0 kbyte	[filförteckning]