Paket: mummer (3.23+dfsg-8) [debports]

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Hemsida [mummer.sourceforge.net]

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Efficient sequence alignment of full genomes

MUMmer is a system for rapidly aligning entire genomes, whether in complete or draft form. For example, MUMmer 3.0 can find all 20-basepair or longer exact matches between a pair of 5-megabase genomes in 13.7 seconds, using 78 MB of memory, on a 2.4 GHz Linux desktop computer. MUMmer can also align incomplete genomes; it handles the 100s or 1000s of contigs from a shotgun sequencing project with ease, and will align them to another set of contigs or a genome using the NUCmer program included with the system. If the species are too divergent for DNA sequence alignment to detect similarity, then the PROmer program can generate alignments based upon the six-frame translations of both input sequences.

Andra paket besläktade med mummer

beror

rekommenderar

föreslår

enhances

dep: gawk

GNU awk, a pattern scanning and processing language
dep: libc6 (>= 2.34)

GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
dep: libgcc-s2 (>= 4.2.1)

GCC stödbibliotek
dep: libstdc++6 (>= 11)

GNU standardbibliotek v3 för C++
dep: perl

Larry Wall's Practical Extraction and Report Language

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Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Paketstorlek	Installerad storlek	Filer
m68k (inofficiell anpassning)	633,3 kbyte	3.193,0 kbyte	[filförteckning]