Paket: brig (0.95+dfsg-3)

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Hemsida [sourceforge.net]

Liknande paket:

BLAST Ring Image Generator

BRIG can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data.

 * Images show similarity between a central reference sequence and other
   sequences as concentric rings.
 * BRIG will perform all BLAST comparisons and file parsing automatically
   via a simple GUI.
 * Contig boundaries and read coverage can be displayed for draft genomes;
   customized graphs and annotations can be displayed.
 * Using a user-defined set of genes as input, BRIG can display gene
   presence, absence, truncation or sequence variation in a set of
   complete genomes, draft genomes or even raw, unassembled sequence data.
 * BRIG also accepts SAM-formatted read-mapping files enabling genomic
   regions present in unassembled sequence data from multiple samples to
   be compared simultaneously

Andra paket besläktade med brig

beror

rekommenderar

föreslår

enhances

dep: cgview

Circular Genome Viewer
dep: default-jre

Standard Java or Java compatible Runtime

eller java6-runtime

virtuellt paket som tillhandahålls av default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre, openjdk-8-jre

eller java7-runtime

virtuellt paket som tillhandahålls av default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre, openjdk-8-jre

eller java8-runtime

virtuellt paket som tillhandahålls av default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre, openjdk-8-jre

eller java9-runtime

virtuellt paket som tillhandahålls av default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre

eller java10-runtime

virtuellt paket som tillhandahålls av default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre

eller java11-runtime

virtuellt paket som tillhandahålls av default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre
dep: jarwrapper (>= 0.5)

Run executable Java .jar files
dep: libjdom1-java

lightweight and fast library using XML
dep: libswing-layout-java

Extensions to Swing layout

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