Paket: python-pbgenomicconsensus (2.3.2-5)

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Liknande paket:

Pacific Biosciences variant and consensus caller (Python 2)

The GenomicConsensus package provides Quiver, Pacific Biosciences' flagship consensus and variant caller. Quiver is an algorithm that finds the maximum likelihood template sequence given PacBio reads of the template. These reads are modeled using a conditional random field approach that prescribes a probability to a read given a template sequence. In addition to the base sequence of each read, Quiver uses several additional quality value covariates that the base caller provides.

This package is part of the SMRTAnalysis suite and provides the Python 2 backend library.

Andra paket besläktade med python-pbgenomicconsensus

beror

rekommenderar

föreslår

enhances

dep: python

interactive high-level object-oriented language (Python2 version)
dep: python-h5py

general-purpose Python interface to hdf5 (Python 2)
dep: python-numpy

Numerical Python adds a fast array facility to the Python language
dep: python-pbcommand

common command-line interface for Pacific Biosciences analysis modules
dep: python-pbconsensuscore

algorithms for PacBio multiple sequence consensus -- Python 2
dep: python-pbcore

Python 2 library for processing PacBio data files

sug: python-consensuscore2

generate consensus sequences for PacBio data -- Python 2

Hämta python-pbgenomicconsensus

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Arkitektur	Paketstorlek	Installerad storlek	Filer
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