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[ Källkod: tree-puzzle  ]

Paket: tree-puzzle (5.3~rc16+dfsg-8)

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Reconstruction of phylogenetic trees by maximum likelihood

TREE-PUZZLE (the new name for PUZZLE) is an interactive console program that implements a fast tree search algorithm, quartet puzzling, that allows analysis of large data sets and automatically assigns estimations of support to each internal branch. TREE-PUZZLE also computes pairwise maximum likelihood distances as well as branch lengths for user specified trees. Branch lengths can also be calculated under the clock-assumption. In addition, TREE-PUZZLE offers a novel method, likelihood mapping, to investigate the support of a hypothesized internal branch without computing an overall tree and to visualize the phylogenetic content of a sequence alignment.

Märken: Field: Biologi, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::analysing, use::comparing, Supports Format: Plain Text, Works with: Behöver ett märke till

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Hämtningar för alla tillgängliga arkitekturer
Arkitektur Paketstorlek Installerad storlek Filer
amd64 167,7 kbyte404,0 kbyte [filförteckning]
arm64 155,9 kbyte384,0 kbyte [filförteckning]
armel 160,8 kbyte412,0 kbyte [filförteckning]
armhf 151,9 kbyte304,0 kbyte [filförteckning]
i386 179,4 kbyte488,0 kbyte [filförteckning]
mips64el 167,4 kbyte468,0 kbyte [filförteckning]
mipsel 167,1 kbyte449,0 kbyte [filförteckning]
ppc64el 176,3 kbyte493,0 kbyte [filförteckning]
s390x 154,3 kbyte412,0 kbyte [filförteckning]