[ Källkod: pizzly ]
Paket: pizzly (0.37.3+ds-5)
Länkar för pizzly
Debianresurser:
Hämta källkodspaketet pizzly:
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Externa resurser:
- Hemsida [github.com]
Liknande paket:
Identifies gene fusions in RNA sequencing data
For the interpretation of the transcriptome (the abundance and sequence of RNA) of tomour cells one is particularly interested in transcripts that cannot be mapped to single genes but that are seen to be fused as parts from two genes. Likely eplanations are chromosomal translocations.
Pizzly can identify novel such peculiarities, building on interpretations on variable splicing by the tool kallisto. Both tools are elements of the bcbio workflow.
Andra paket besläktade med pizzly
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- dep: kallisto
- near-optimal RNA-Seq quantification
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- dep: libc6 (>= 2.29)
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC stödbibliotek
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- dep: libstdc++6 (>= 9)
- GNU standardbibliotek v3 för C++
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: zlib1g (>= 1:1.1.4)
- Kompressionsbibliotek - körtidspaket
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- rec: python3-h5py
- general-purpose Python interface to hdf5
Hämta pizzly
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| ppc64el | 282,7 kbyte | 988,0 kbyte | [filförteckning] |