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[ Källkod: rampler  ]

Paket: rampler (2.0.0-1)

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module for sampling genomic sequences

Standalone module for sampling genomic sequences. It supports two modes, random subsampling of sequencer data to a desired depth (given the reference length) and file splitting to desired size in bytes.

Rampler takes as first input argument a file in FASTA/FASTQ format which can be compressed with gzip. The rest of input parameters depend on the mode of operation. The output is stored into a file(s) which is in the same format as the input file but uncompressed.

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i386 22,8 kbyte63,0 kbyte [filförteckning]