Paket: velvet (1.2.10+dfsg1-8)

Länkar för velvet

Debianresurser:

Hämta källkodspaketet velvet:

Ansvariga:

Debian Med Packaging Team (QA-sida, E-postarkiv)
Charles Plessy (QA-sida)
Andreas Tille (QA-sida)

Externa resurser:

Hemsida [github.com]

Liknande paket:

Nucleic acid sequence assembler for very short reads

Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom.

Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired read information, if available, to retrieve the repeated areas between contigs.

Märken: Field: Biologi, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Purpose: Analysing

Andra paket besläktade med velvet

beror

rekommenderar

föreslår

enhances

dep: libc6 (>= 2.34)

GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
dep: libgomp1 (>= 4.9)

GCC OpenMP (GOMP) support library
dep: zlib1g (>= 1:1.2.0.2)

Kompressionsbibliotek - körtidspaket

sug: velvet-example

Example data for the Velvet sequence assembler

Hämta velvet

Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	658,0 kbyte	1.256,0 kbyte	[filförteckning]