Balík: r-bioc-genomicalignments (1.34.0-1)

Odkazy pre r-bioc-genomicalignments

Zdroje Debian:

Stiahnuť zdrojový balík r-bioc-genomicalignments:

Správcovia:

Externé zdroje:

Domovská stránka [bioconductor.org]

Podobné balíky:

BioConductor representation and manipulation of short genomic alignments

This BioConductor package provides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.

Ostatné balíky súvisiace s balíkom r-bioc-genomicalignments

závisí

odporúča

navrhuje

vylepšuje

dep: libc6 (>= 2.17) [arm64, ppc64el]

knižnica GNU C - zdieľané knižnice
tiež virtuálny balík poskytovaný balíkom libc6-udeb

dep: libc6 (>= 2.4) [nie arm64, ppc64el]
dep: r-api-4.0

virtuálny balík poskytovaný balíkom r-base-core
dep: r-api-bioc-3.16

virtuálny balík poskytovaný balíkom r-bioc-biocgenerics
dep: r-base-core (>= 4.2.2.20221110-1)

jadro GNU R na štatistické výpočty a grafický systém
dep: r-bioc-biocgenerics (>= 0.37.0)

generic functions for Bioconductor
dep: r-bioc-biocparallel

BioConductor facilities for parallel evaluation
dep: r-bioc-biostrings (>= 2.55.7)

GNU R string objects representing biological sequences
dep: r-bioc-genomeinfodb (>= 1.13.1)

BioConductor utilities for manipulating chromosome identifiers
dep: r-bioc-genomicranges (>= 1.41.5)

BioConductor representation and manipulation of genomic intervals
dep: r-bioc-iranges (>= 2.23.9)

GNU R low-level containers for storing sets of integer ranges
dep: r-bioc-rsamtools (>= 1.31.2)

GNU R binary alignment (BAM), variant call (BCF), or tabix file import
dep: r-bioc-s4vectors (>= 0.27.12)

BioConductor S4 implementation of vectors and lists
dep: r-bioc-summarizedexperiment (>= 1.9.13)

BioConductor assay container

sug: r-bioc-biocstyle

standard styles for vignettes and other Bioconductor documents
sug: r-bioc-bsgenome

BioConductor infrastructure for Biostrings-based genome data packages
sug: r-bioc-deseq2

R package for RNA-Seq Differential Expression Analysis
sug: r-bioc-edger

Empirical analysis of digital gene expression data in R
sug: r-bioc-genomicfeatures

GNU R tools for making and manipulating transcript centric annotations
sug: r-bioc-rtracklayer

GNU R interface to genome browsers and their annotation tracks
sug: r-bioc-shortread

GNU R classes and methods for high-throughput short-read sequencing data
sug: r-cran-runit

GNU R package providing unit testing framework

Stiahnuť r-bioc-genomicalignments

Stiahnuť pre všetky dostupné architektúry
Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
amd64	2,062.8 kB	2,909.0 kB	[zoznam súborov]
arm64	2,062.0 kB	2,969.0 kB	[zoznam súborov]
armel	2,058.7 kB	2,904.0 kB	[zoznam súborov]
armhf	2,059.2 kB	2,904.0 kB	[zoznam súborov]
i386	2,025.0 kB	2,874.0 kB	[zoznam súborov]
mips64el	2,058.8 kB	2,975.0 kB	[zoznam súborov]
mipsel	2,059.0 kB	2,910.0 kB	[zoznam súborov]
ppc64el	2,064.2 kB	2,969.0 kB	[zoznam súborov]
s390x	2,061.5 kB	2,913.0 kB	[zoznam súborov]