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Package: libgkarrays1t64 (2.1.0+dfsg-4.2)

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library to query large collection of NGS sequences

Gk-arrays are provided as a simple-to-use C++ library dedicated to queries on large collection of sequences as produced by high-throughput sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche).

Gk-arrays index k-mers of reads and allows one to answer different queries on that read collection (e.g. how many reads share this k-mer? where does this k-mer occur in the read collection?).

Gk-arrays consist of a space-efficient alternative to hash tables while being similar in terms of query times.

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Download libgkarrays1t64

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 59.5 kB248.0 kB [list of files]
amd64 56.2 kB174.0 kB [list of files]
arm64 52.0 kB245.0 kB [list of files]
armel 52.5 kB149.0 kB [list of files]
armhf 51.6 kB133.0 kB [list of files]
hppa (unofficial port) 69.2 kB193.0 kB [list of files]
i386 62.7 kB185.0 kB [list of files]
ia64 (unofficial port) 70.0 kB247.0 kB [list of files]
m68k (unofficial port) 60.7 kB181.0 kB [list of files]
mips64el 55.0 kB255.0 kB [list of files]
ppc64 (unofficial port) 59.0 kB247.0 kB [list of files]
ppc64el 58.1 kB246.0 kB [list of files]
riscv64 57.7 kB149.0 kB [list of files]
s390x 52.5 kB173.0 kB [list of files]
sh4 (unofficial port) 64.2 kB246.0 kB [list of files]
sparc64 (unofficial port) 50.0 kB2,107.0 kB [list of files]
x32 (unofficial port) 56.7 kB169.0 kB [list of files]