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Package: porechop (0.2.4+dfsg-5) [debports]

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adapter trimmer for Oxford Nanopore reads

Porechop is a tool for finding and removing adapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate reads. Porechop performs thorough alignments to effectively find adapters, even at low sequence identity. Porechop also supports demultiplexing of Nanopore reads that were barcoded with the Native Barcoding Kit, PCR Barcoding Kit or Rapid Barcoding Kit.

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Download porechop

Download for all available architectures
Architecture Package Size Installed Size Files
ia64 (unofficial port) 61.8 kB290.0 kB [list of files]