Package: blasr (5.3.5+dfsg-6 and others) [debports]

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mapping single-molecule sequencing reads

Basic local alignment with successive refinement (BLASR) is a method for mapping single-molecule sequencing reads against a reference genome. Such reads are thousands of bases long, with divergence between them and the genome being dominated by insertion and deletion error.

Other Packages Related to blasr

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dep: libblasr5.3.5 (>= 5.3.5+dfsg)

tools for aligning PacBio reads to target sequences
dep: libc6.1 (>= 2.37)

GNU C Library: Shared libraries
also a virtual package provided by libc6.1-udeb
dep: libhdf5-cpp-103-1 (>= 1.10.5)

HDF5 - C++ runtime files - serial version
dep: libpbbam2.4.0 (>= 2.4.0+dfsg)

Pacific Biosciences binary alignment/map (BAM) library
dep: libpbcopper2.3.0 (>= 2.3.0+dfsg)

data structures, algorithms, and utilities for C++ applications
dep: libpbseq (>= 5.3.5+dfsg-4~)

library for analyzing PacBio sequencing data
dep: libstdc++6 (>= 13.1)

GNU Standard C++ Library v3
dep: libunwind8

library to determine the call-chain of a program - runtime

Download blasr

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
ia64 (unofficial port)	5.3.5+dfsg-6+b4	271.0 kB	1,226.0 kB	[list of files]