[ Source: allelecount ]
Package: allelecount (4.3.0-2 and others)
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NGS copy number algorithms
Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each allele [ACGT] at that location (given any filter settings).
The alleleCount package primarily exists to prevent code duplication between some other projects, specifically AscatNGS and Battenberg.
Other Packages Related to allelecount
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libhts3t64 (>= 1.17)
- C library for high-throughput sequencing data formats
Download allelecount
Architecture | Version | Package Size | Installed Size | Files |
---|---|---|---|---|
i386 | 4.3.0-2+b1 | 29.1 kB | 90.0 kB | [list of files] |