Package: bali-phy (3.6.1+dfsg-3 and others)

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Homepage [www.bali-phy.org]

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Bayesian Inference of Alignment and Phylogeny

BAli-Phy estimates multiple sequence alignments and evolutionary trees from unaligned DNA, amino acid, or codon sequences. BAli-Phy uses MCMC to estimate evolutionary trees, positive selection, and branch lengths while averaging over alternative alignments. BAli-Phy can display alignment ambiguity graphically in an alignment uncertainty (AU) plot.

BAli-Phy can also estimate phylogenies from a fixed alignment (like MrBayes and BEAST) using substitution models like GTR+gamma. BAli-Phy automatically estimates relative rates for each gene.

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dep: libc6 (>= 2.38) [not alpha, ia64, x32]
dep: libc6.1 (>= 2.31) [ia64]

GNU C Library: Shared libraries
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dep: libc6.1 (>= 2.38) [alpha]
dep: libcairo2 (>= 1.4.10)

Cairo 2D vector graphics library
dep: libgcc-s1 (>= 3.0) [ppc64el, s390x]

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dep: libgcc-s1 (>= 3.4) [alpha, amd64, ppc64, sparc64, x32]

dep: libgcc-s1 (>= 3.5) [armel, armhf]

dep: libgcc-s1 (>= 4.2) [i386, ia64]

dep: libgcc-s1 (>= 4.5) [arm64, mips64el, riscv64]
dep: libgcc-s2 (>= 4.2.1) [m68k]

GCC support library
dep: libgcc-s4 (>= 4.1.1) [hppa]

GCC support library
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dep: libstdc++6 (>= 14) [not alpha, ia64, m68k, x32]

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Download bali-phy

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	3.6.1+dfsg-3	6,361.3 kB	40,360.0 kB	[list of files]
amd64	3.6.1+dfsg-3	6,676.8 kB	39,067.0 kB	[list of files]
arm64	3.6.1+dfsg-3	6,024.2 kB	36,555.0 kB	[list of files]
armel	3.6.1+dfsg-3	5,076.0 kB	32,497.0 kB	[list of files]
armhf	3.6.1+dfsg-3	4,629.1 kB	23,653.0 kB	[list of files]
hppa (unofficial port)	3.6.1+dfsg-3	6,226.6 kB	37,832.0 kB	[list of files]
i386	3.6.1+dfsg-3	6,350.6 kB	37,805.0 kB	[list of files]
ia64 (unofficial port)	3.6.1+dfsg-1	9,006.8 kB	69,870.0 kB	[list of files]
m68k (unofficial port)	3.6.1+dfsg-3	5,450.2 kB	34,598.0 kB	[list of files]
mips64el	3.6.1+dfsg-3	5,923.0 kB	44,997.0 kB	[list of files]
ppc64 (unofficial port)	3.6.1+dfsg-3	6,105.6 kB	44,043.0 kB	[list of files]
ppc64el	3.6.1+dfsg-3	6,422.8 kB	42,177.0 kB	[list of files]
riscv64	3.6.1+dfsg-3	6,670.8 kB	31,791.0 kB	[list of files]
s390x	3.6.1+dfsg-3	5,229.2 kB	36,851.0 kB	[list of files]
sparc64 (unofficial port)	3.6.1+dfsg-3	5,204.0 kB	63,539.0 kB	[list of files]
x32 (unofficial port)	3.5.0.1+dfsg-1	5,788.7 kB	33,442.0 kB	[list of files]