Пакет: bandage (0.9.0-2 и другие)

Ссылки для bandage

Ресурсы Debian:

Исходный код bandage:

Сопровождающие:

Внешние ресурсы:

Сайт [rrwick.github.io]

Подобные пакеты:

Bioinformatics Application for Navigating De novo Assembly Graphs Easily

Bandage is a GUI program that allows users to interact with the assembly graphs made by de novo assemblers such as Velvet, SPAdes, MEGAHIT and others.

De novo assembly graphs contain not only assembled contigs but also the connections between those contigs, which were previously not easily accessible. Bandage visualises assembly graphs, with connections, using graph layout algorithms. Nodes in the drawn graph, which represent contigs, can be automatically labelled with their ID, length or depth. Users can interact with the graph by moving, labelling and colouring nodes. Sequence information can also be extracted directly from the graph viewer. By displaying connections between contigs, Bandage opens up new possibilities for analysing and improving de novo assemblies that are not possible by looking at contigs alone.

More information and download links are on the Bandage website: rrwick.github.io/Bandage

The package is relevant to the field of genome assembly.

Теги: Инструментарий интерфейса: Qt

Другие пакеты, относящиеся к bandage

зависимости

рекомендации

предложения

enhances

dep: libc6 (>= 2.34)

библиотека GNU C: динамически подключаемые библиотеки
также виртуальный пакет, предоставляемый libc6-udeb
dep: libgcc-s1 (>= 4.0)

вспомогательная библиотека GCC
dep: libqt5core5t64 (>= 5.15.1)

Qt 5 core module
dep: libqt5gui5t64 (>= 5.8.0)

Qt 5 GUI module

или libqt5gui5-gles (>= 5.8.0)

Qt 5 GUI module — OpenGL ES variant
dep: libqt5svg5 (>= 5.6.0~beta)

Qt 5 SVG module
dep: libqt5widgets5t64 (>= 5.15.1)

Qt 5 widgets module
dep: libstdc++6 (>= 13.1)

стандартная библиотека GNU C++ версии 3

Загрузка bandage

Загрузить для всех доступных архитектур
Архитектура	Версия	Размер пакета	В установленном виде	Файлы
ppc64el	0.9.0-2+b1	952,1 Кб	2 719,0 Кб	[список файлов]