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/usr/share/doc/bppsuite-examples/changelog.Debian.gz
/usr/share/doc/bppsuite-examples/changelog.gz
/usr/share/doc/bppsuite-examples/copyright
/usr/share/doc/bppsuite/examples/AlignmentScoring/AlnScores.bpp
/usr/share/doc/bppsuite/examples/ConsensusTree/Consense.bpp
/usr/share/doc/bppsuite/examples/Data/HIV1_REF_2010_gag_DNA.fasta.gz
/usr/share/doc/bppsuite/examples/Data/HIV1_REF_2010_gag_macse_AA.fasta.gz
/usr/share/doc/bppsuite/examples/Data/HIV1_REF_2010_gag_macse_DNA.fasta.gz
/usr/share/doc/bppsuite/examples/Data/LSU.dnd
/usr/share/doc/bppsuite/examples/Data/LSU.phy.gz
/usr/share/doc/bppsuite/examples/Data/LSUrooted.dnd.gz
/usr/share/doc/bppsuite/examples/Data/Myo.dnd
/usr/share/doc/bppsuite/examples/Data/Myo.mase.gz
/usr/share/doc/bppsuite/examples/Data/OutGroup.txt
/usr/share/doc/bppsuite/examples/Data/lysozymeLarge.dnd
/usr/share/doc/bppsuite/examples/Data/lysozymeLarge.fasta.gz
/usr/share/doc/bppsuite/examples/Data/treeList.dnd.gz
/usr/share/doc/bppsuite/examples/Data/treeList2.dnd
/usr/share/doc/bppsuite/examples/Distance/Dist.bpp
/usr/share/doc/bppsuite/examples/Drawing/TreeDraw.bpp
/usr/share/doc/bppsuite/examples/MaximumLikelihood/Codons/BranchModel/ML.bpp.gz
/usr/share/doc/bppsuite/examples/MaximumLikelihood/Codons/CladeModel/ML.bpp.gz
/usr/share/doc/bppsuite/examples/MaximumLikelihood/Codons/M0/ML.bpp.gz
/usr/share/doc/bppsuite/examples/MaximumLikelihood/Codons/M1/ML.bpp.gz
/usr/share/doc/bppsuite/examples/MaximumLikelihood/Codons/M2/ML.bpp.gz
/usr/share/doc/bppsuite/examples/MaximumLikelihood/Nucleotides/Homogeneous/Ancestor.bpp
/usr/share/doc/bppsuite/examples/MaximumLikelihood/Nucleotides/Homogeneous/ML.bpp.gz
/usr/share/doc/bppsuite/examples/MaximumLikelihood/Nucleotides/NonHomogeneousGG/MLNHGG.bpp.gz
/usr/share/doc/bppsuite/examples/MaximumLikelihood/Nucleotides/NonHomogeneousGeneral/Ancestor.bpp
/usr/share/doc/bppsuite/examples/MaximumLikelihood/Nucleotides/NonHomogeneousGeneral/MLNH.bpp.gz
/usr/share/doc/bppsuite/examples/MaximumLikelihood/Proteins/Homogeneous/Ancestor.bpp
/usr/share/doc/bppsuite/examples/MaximumLikelihood/Proteins/Homogeneous/ML.bpp.gz
/usr/share/doc/bppsuite/examples/Parsimony/Pars.bpp
/usr/share/doc/bppsuite/examples/PopStats/PopStats.bpp
/usr/share/doc/bppsuite/examples/PopStats/PopStatsCodonSites.bpp
/usr/share/doc/bppsuite/examples/PopStats/alignment.phy
/usr/share/doc/bppsuite/examples/README
/usr/share/doc/bppsuite/examples/ReRooting/ReRoot.bpp
/usr/share/doc/bppsuite/examples/SequenceManipulation/SeqMan.bpp
/usr/share/doc/bppsuite/examples/SequenceManipulation/SeqMan2.bpp
/usr/share/doc/bppsuite/examples/SequenceSimulation/Homogeneous/SeqGen.bpp
/usr/share/doc/bppsuite/examples/SequenceSimulation/HomogeneousCovarion/SeqGen.bpp
/usr/share/doc/bppsuite/examples/SequenceSimulation/NonHomogeneous/SeqGen.bpp
/usr/share/doc/bppsuite/examples/SequenceSimulation/WithSiteSpecificSettings/SeqGen.bpp
/usr/share/doc/bppsuite/examples/SequenceSimulation/WithSiteSpecificSettings/infos.csv
/usr/share/doc/bppsuite/examples/control
/usr/share/doc/bppsuite/examples/ref/HIV1_REF_2010_gag.scores.txt.gz
/usr/share/doc/bppsuite/examples/ref/Homogeneous-LSUSim.fasta.gz
/usr/share/doc/bppsuite/examples/ref/HomogeneousCovarion-LSUSim.fasta.gz
/usr/share/doc/bppsuite/examples/ref/LSU.ML.dnd
/usr/share/doc/bppsuite/examples/ref/Myo.ML.dnd
/usr/share/doc/bppsuite/examples/ref/NonHomogeneous-LSUSim.fasta.gz
/usr/share/doc/bppsuite/examples/ref/README.test_data
/usr/share/doc/bppsuite/examples/ref/WithSiteSpecificSettings-LSUSim.fasta
/usr/share/doc/bppsuite/examples/ref/branch-lysozymeLarge.ML.dnd
/usr/share/doc/bppsuite/examples/ref/clade-lysozymeLarge.ML.dnd
/usr/share/doc/bppsuite/examples/ref/dist-LSU.mat.gz
/usr/share/doc/bppsuite/examples/ref/m0-lysozymeLarge.ML.dnd
/usr/share/doc/bppsuite/examples/ref/popstats-alignment.codons.csv
/usr/share/doc/bppsuite/examples/ref/seqman-LSU.fas.gz
/usr/share/doc/bppsuite/examples/ref/treeList2_rooted.dnd
/usr/share/doc/bppsuite/examples/ref/treedraw-LSU.svg
/usr/share/doc/bppsuite/examples/run-unit-test
/usr/share/doc/bppsuite/examples/tree.dnd