[ Источник: vdjtools ]
Пакет: vdjtools (1.2.1+git20190311-5) [non-free]
Ссылки для vdjtools
Ресурсы Debian:
- Сообщения об ошибках
- Developer Information
- Debian журнал изменений
- Файл авторских прав
- Отслеживание заплат Debian
Исходный код vdjtools:
- [vdjtools_1.2.1+git20190311-5.dsc]
- [vdjtools_1.2.1+git20190311.orig.tar.gz]
- [vdjtools_1.2.1+git20190311-5.debian.tar.xz]
Сопровождающие:
- Debian Med Packaging Team (Страница КК, Почтовый архив)
- Steffen Moeller (Страница КК)
- tony mancill (Страница КК)
Внешние ресурсы:
- Сайт [github.com]
Подобные пакеты:
framework for post-analysis of B/T cell repertoires
VDJtools is an open-source Java/Groovy-based framework designed to facilitate analysis of immune repertoire sequencing (RepSeq) data. VDJtools computes a wide set of statistics and is able to perform various forms of cross-sample analysis. Both comprehensive tabular output and publication-ready plots are provided.
The main aims of the VDJtools Project are:
* To ensure consistency between post-analysis methods and results * To save the time of bioinformaticians analyzing RepSeq data * To create an API framework facilitating development of new RepSeq analysis applications * To provide a simple enough command line tool so it could be used by immunologists and biologists with little computational background
Другие пакеты, относящиеся к vdjtools
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- dep: default-jre
- Standard Java or Java compatible Runtime
- или java-runtime
- виртуальный пакет, предоставляемый default-jre
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- dep: libvdjtools-java
- Java library of vdjtools
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- rec: r-cran-ape
- GNU R package for Analyses of Phylogenetics and Evolution
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- rec: r-cran-circlize
- Circular Visualization
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- rec: r-cran-ffield
- Force field simulation for a set of points
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- rec: r-cran-ggplot2
- implementation of the Grammar of Graphics
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- rec: r-cran-gplots
- GNU R package with tools for plotting data by Greg Warnes et al
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- rec: r-cran-gridbase
- GNU R Integration of base and grid graphics
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- rec: r-cran-gridextra
- GNU R package with extensions for the grid package
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- rec: r-cran-mass
- GNU R package of Venables and Ripley's MASS
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- rec: r-cran-plotrix
- GNU R package providing various plotting functions
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- rec: r-cran-rcolorbrewer
- GNU R package providing suitable color palettes
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- rec: r-cran-reshape
- Flexibly reshape data
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- rec: r-cran-reshape2
- Flexibly reshape data: a reboot of the reshape package
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- rec: r-cran-scales
- Scale functions for visualization
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- rec: r-cran-venndiagram
- Generate High-Resolution Venn and Euler Plots
Загрузка vdjtools
| Архитектура | Размер пакета | В установленном виде | Файлы |
|---|---|---|---|
| all | 41,7 Кб | 52,0 Кб | [список файлов] |