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[ Источник: fastml  ]

Пакет: fastml (3.11-3)

Ссылки для fastml

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Ресурсы Debian:

Исходный код fastml:

Сопровождающие:

Внешние ресурсы:

Подобные пакеты:

maximum likelihood ancestral amino-acid sequence reconstruction

FastML is a bioinformatics tool for the reconstruction of ancestral sequences based on the phylogenetic relations between homologous sequences. FastML runs several algorithms that reconstruct the ancestral sequences with emphasis on an accurate reconstruction of both indels and characters. For character reconstruction the previously described FastML algorithms are used to efficiently infer the most likely ancestral sequences for each internal node of the tree. Both joint and the marginal reconstructions are provided. For indels reconstruction the sequences are first coded according to the indel events detected within the multiple sequence alignment (MSA) and then a state-of-the-art likelihood model is used to reconstruct ancestral indels states. The results are the most probable sequences, together with posterior probabilities for each character and indel at each sequence position for each internal node of the tree. FastML is generic and is applicable for any type of molecular sequences (nucleotide, protein, or codon sequences).

Другие пакеты, относящиеся к fastml

  • зависимости
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  • предложения
  • enhances

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Архитектура Размер пакета В установленном виде Файлы
amd64 902,9 Кб3 394,0 Кб [список файлов]
arm64 761,7 Кб3 050,0 Кб [список файлов]
armel 739,4 Кб3 071,0 Кб [список файлов]
armhf 745,1 Кб2 115,0 Кб [список файлов]
i386 931,6 Кб3 543,0 Кб [список файлов]
mips64el 761,8 Кб4 037,0 Кб [список файлов]
mipsel 777,2 Кб3 976,0 Кб [список файлов]
ppc64el 871,4 Кб3 994,0 Кб [список файлов]
s390x 755,3 Кб3 442,0 Кб [список файлов]