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[ Источник: t-coffee  ]

Пакет: t-coffee (13.41.0.28bdc39+dfsg-4)

Ссылки для t-coffee

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Ресурсы Debian:

Исходный код t-coffee:

Сопровождающие:

Внешние ресурсы:

Подобные пакеты:

Multiple Sequence Alignment

T-Coffee is a multiple sequence alignment package. Given a set of sequences (Proteins or DNA), T-Coffee generates a multiple sequence alignment. Version 2.00 and higher can mix sequences and structures.

T-Coffee allows the combination of a collection of multiple/pairwise, global or local alignments into a single model. It can also estimate the level of consistency of each position within the new alignment with the rest of the alignments. See the pre-print for more information

T-Coffee has a special called M-Coffee that makes it possible to combine the output of many multiple sequence alignment packages. In its published version, it uses MUSCLE, PROBCONS, POA, DiAlign-TS, MAFFT, Clustal W, PCMA and T-Coffee. A special version has been made for Debian, DM-Coffee, that uses only free software by replacing Clustal W by Kalign. Using the 8 Methods of M-Coffee can sometimes be a bit heavy. You can use a subset of your favorite methods if you prefer.

Теги: Область: Биология, Биоинформатика, Реализовано на: implemented-in::c, interface::commandline, Роль: Программа, Область: Утилита, Цель: use::analysing, use::comparing, Поддерживаемые форматы: Требуется дополнительный тег, works-with-format::plaintext, works-with::TODO

Другие пакеты, относящиеся к t-coffee

  • зависимости
  • рекомендации
  • предложения
  • enhances

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armhf 853,7 Кб1 912,0 Кб [список файлов]