[ Source: iqtree ]
Package: iqtree (1.6.9+dfsg-1)
Links for iqtree
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Download Source Package iqtree:
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External Resources:
- Homepage [www.cibiv.at]
Similar packages:
efficient phylogenetic software by maximum likelihood
IQ-TREE is a very efficient maximum likelihood phylogenetic software with following key features among others:
* A novel fast and effective stochastic algorithm to estimate maximum likelihood trees. IQ-TREE outperforms both RAxML and PhyML in terms of likelihood while requiring similar amount of computing time (see Nguyen et al., 2015) * An ultrafast bootstrap approximation to assess branch supports (see Minh et al., 2013). * A wide range of substitution models for binary, DNA, protein, codon, and morphological alignments. * Ultrafast model selection for all data types, 10 to 100 times faster than jModelTest and ProtTest. * Finding best partition scheme like PartitionFinder. * Partitioned models with mixed data types for phylogenomic (multi- gene) alignments, allowing for separate, proportional, or joint branch lengths among genes. * Supporting the phylogenetic likelihod library (PLL) (see Flouri et al., 2014)
Other Packages Related to iqtree
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- dep: libc6 (>= 2.14) [amd64]
- Biblioteca GNU C: Bibliotecas partilhadas
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.7) [i386]
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- dep: libgcc1 (>= 1:4.0) [amd64]
- Biblioteca de suporte do GCC
- dep: libgcc1 (>= 1:4.2) [i386]
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- dep: libgomp1 (>= 4.9)
- GCC OpenMP (GOMP) support library
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- dep: libopenmpi3
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- dep: libstdc++6 (>= 5.2)
- Biblioteca C++ padrão GNU v3
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- dep: zlib1g (>= 1:1.1.4)
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Download iqtree
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 2,749.5 kB | 16,156.0 kB | [list of files] |
| i386 | 2,563.3 kB | 14,574.0 kB | [list of files] |