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[ Source: rdkit  ]

Package: python3-rdkit (202309.3-6 and others)

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Collection of cheminformatics and machine-learning software

RDKit is a Python/C++ based cheminformatics and machine-learning software environment. Features Include:

 * Chemical reaction handling and transforms
 * Substructure searching with SMARTS
 * Canonical SMILES
 * Molecule-molecule alignment
 * Large number of molecular descriptors, including topological,
   compositional, EState, SlogP/SMR, VSA and Feature-map vectors
 * Fragmentation using RECAP rules
 * 2D coordinate generation and depiction, including constrained depiction
 * 3D coordinate generation using geometry embedding
 * UFF and MMFF94 forcefields
 * Chirality support, including calculation of (R/S) stereochemistry codes
 * 2D pharmacophore searching
 * Fingerprinting, including Daylight-like, atom pairs, topological
   torsions, Morgan algorithm and MACCS keys
 * Calculation of shape similarity
 * Multi-molecule maximum common substructure
 * Machine-learning via clustering and information theory algorithms
 * Gasteiger-Marsili partial charge calculation

File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit binary format.

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Download python3-rdkit

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 202309.3-4 4,105.1 kB28,954.0 kB [list of files]
amd64 202309.3-6 4,507.0 kB31,121.0 kB [list of files]
arm64 202309.3-6 4,235.7 kB32,271.0 kB [list of files]
armel 202309.3-6 3,651.2 kB22,784.0 kB [list of files]
armhf 202309.3-6 3,758.2 kB20,252.0 kB [list of files]
hppa (unofficial port) 202009.5-2 3,843.8 kB24,156.0 kB [list of files]
i386 202309.3-6 4,310.4 kB25,218.0 kB [list of files]
m68k (unofficial port) 202309.3-6 4,027.7 kB24,001.0 kB [list of files]
mips64el 202309.3-6 3,861.8 kB34,494.0 kB [list of files]
ppc64 (unofficial port) 202309.3-6 4,318.4 kB36,429.0 kB [list of files]
ppc64el 202309.3-6 4,362.5 kB34,957.0 kB [list of files]
riscv64 202309.3-6 4,460.9 kB28,693.0 kB [list of files]
s390x 202309.3-6 4,347.8 kB30,627.0 kB [list of files]
sparc64 (unofficial port) 202309.3-6 3,957.3 kB67,971.0 kB [list of files]