[ Source: ggd-utils ]
Package: ggd-utils (1.0.0+ds-1 and others)
Links for ggd-utils
Debian Resources:
Download Source Package ggd-utils:
Maintainers:
External Resources:
- Homepage [github.com]
Similar packages:
programs for use in ggd
Takes a genome file and (currently) a .vcf.gz or a .bed.gz and checks that:
* a .tbi is present
* the VCF has ""##fileformat=VCF" as the first
line
* the VCF has a #CHROM header
* the chromosome are in the order specified by
the genome file (and present)
* the positions are sorted
* the positions are <= the chromosome lengths
defined in the genome file.
As a result, any new genome going into GGD will have a .genome file that will dictate the sort order and presence or absence of the 'chr' prefix for chromosomes
Other Packages Related to ggd-utils
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- dep: libc6 (>= 2.34)
- GNU Biblioteca C: Bibliotecas compartilhadas
also a virtual package provided by libc6-udeb
Download ggd-utils
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| amd64 | 1.0.0+ds-1+b6 | 1,775.3 kB | 5,126.0 kB | [list of files] |
| arm64 | 1.0.0+ds-1+b6 | 1,530.8 kB | 4,842.0 kB | [list of files] |
| armel | 1.0.0+ds-1+b6 | 1,515.0 kB | 4,907.0 kB | [list of files] |
| armhf | 1.0.0+ds-1+b6 | 1,507.8 kB | 4,883.0 kB | [list of files] |
| i386 | 1.0.0+ds-1+b6 | 1,651.4 kB | 4,956.0 kB | [list of files] |
| mips64el | 1.0.0+ds-1+b6 | 1,379.6 kB | 5,565.0 kB | [list of files] |
| mipsel | 1.0.0+ds-1+b6 | 1,412.2 kB | 5,462.0 kB | [list of files] |
| ppc64el | 1.0.0+ds-1+b6 | 1,497.5 kB | 4,905.0 kB | [list of files] |
| s390x | 1.0.0+ds-1+b6 | 1,619.4 kB | 5,246.0 kB | [list of files] |