Pakket: libfreecontact0t64 (1.0.21-14)
Verwijzigingen voor libfreecontact0t64
Debian bronnen:
Het bronpakket freecontact downloaden:
Beheerders:
Externe bronnen:
- Homepage [rostlab.org]
Vergelijkbare pakketten:
fast protein contact predictor library
FreeContact is a protein residue contact predictor optimized for speed. Its input is a multiple sequence alignment. FreeContact can function as an accelerated drop-in for the published contact predictors EVfold-mfDCA of DS. Marks (2011) and PSICOV of D. Jones (2011).
FreeContact is accelerated by a combination of vector instructions, multiple threads, and faster implementation of key parts. Depending on the alignment, 8-fold or higher speedups are possible.
A sufficiently large alignment is required for meaningful results. As a minimum, an alignment with an effective (after-weighting) sequence count bigger than the length of the query sequence should be used. Alignments with tens of thousands of (effective) sequences are considered good input.
jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite can be used to generate the alignments, for example.
This package contains the shared library implementing freecontact.
Andere aan libfreecontact0t64 gerelateerde pakketten
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- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- of libblas.so.3
- virtueel pakket geboden door libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
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- dep: libc6 (>= 2.34)
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
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- dep: libgcc-s1 (>= 3.0) [niet armel, armhf]
- GCC support bibliotheek
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
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- dep: libgfortran5 (>= 8)
- Runtime library for GNU Fortran applications
-
- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
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- dep: liblapack3
- Library of linear algebra routines 3 - shared version
- of liblapack.so.3
- virtueel pakket geboden door liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
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- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
libfreecontact0t64 downloaden
| Platform | Pakketgrootte | Geïnstalleerde grootte | Bestanden |
|---|---|---|---|
| amd64 | 81,6 kB | 206,0 kB | [overzicht] |
| arm64 | 72,9 kB | 218,0 kB | [overzicht] |
| armel | 61,5 kB | 165,0 kB | [overzicht] |
| armhf | 61,7 kB | 129,0 kB | [overzicht] |
| i386 | 67,8 kB | 181,0 kB | [overzicht] |
| mips64el | 68,7 kB | 224,0 kB | [overzicht] |
| ppc64el | 87,3 kB | 218,0 kB | [overzicht] |
| riscv64 | 74,2 kB | 149,0 kB | [overzicht] |
| s390x | 70,3 kB | 202,0 kB | [overzicht] |