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[ Bron: bifrost ]
Pakket: libbifrost0 (1.3.1-1)
Verwijzigingen voor libbifrost0
Debian bronnen:
Het bronpakket bifrost downloaden:
Beheerders:
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
library for parallel construction, indexing and querying of de Bruijn graphs
Libbifrost is the shared library for the command-line tool bifrost for sequencing that features a broad range of functions, such as indexing, editing, and querying the graph, and includes a graph coloring method that maps each k-mer of the graph to the genomes it occurs in.
* Build, index, color and query the compacted de Bruijn graph * No need to build the uncompacted de Bruijn graph * Reads or assembled genomes as input * Output graph in GFA (can be visualized with Bandage), FASTA or binary * Graph cleaning: short tip clipping, etc. * Multi-threaded * No parameters to estimate with other tools * Exact or approximate k-mer search of queries
Andere aan libbifrost0 gerelateerde pakketten
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- dep: libc6 (>= 2.34)
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
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- dep: libgcc-s1 (>= 3.0) [niet amd64, mips64el]
- GCC support bibliotheek
- dep: libgcc-s1 (>= 3.4) [amd64, mips64el]
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- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
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- dep: zlib1g (>= 1:1.1.4)
- compressiebibliotheek - programma's
libbifrost0 downloaden
Platform | Pakketgrootte | Geïnstalleerde grootte | Bestanden |
---|---|---|---|
amd64 | 417,9 kB | 1.436,0 kB | [overzicht] |
arm64 | 369,5 kB | 1.324,0 kB | [overzicht] |
mips64el | 350,8 kB | 1.504,0 kB | [overzicht] |
ppc64el | 435,0 kB | 1.644,0 kB | [overzicht] |
s390x | 430,1 kB | 1.524,0 kB | [overzicht] |