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[ Bron: tantan  ]

Pakket: tantan (49-2)

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low complexity and tandem repeat masker for biosequences

tantan is a tool to mask simple regions (low complexity and short-period tandem repeats) in DNA, RNA, and protein sequences. The aim of tantan is to prevent false predictions when searching for homologous regions between two sequences. Simple repeats often align strongly to each other, causing false homology predictions.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: scope::utility, works-with::biological-sequence

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tantan downloaden

Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
alpha (unofficial port) 39,0 kB145,0 kB [overzicht]
amd64 41,1 kB120,0 kB [overzicht]
arm64 37,1 kB144,0 kB [overzicht]
armel 36,9 kB103,0 kB [overzicht]
armhf 34,8 kB79,0 kB [overzicht]
hppa (unofficial port) 39,5 kB105,0 kB [overzicht]
i386 43,5 kB119,0 kB [overzicht]
ia64 (unofficial port) 51,1 kB200,0 kB [overzicht]
m68k (unofficial port) 38,2 kB111,0 kB [overzicht]
mips64el 41,1 kB149,0 kB [overzicht]
ppc64 (unofficial port) 44,0 kB144,0 kB [overzicht]
ppc64el 44,0 kB144,0 kB [overzicht]
riscv64 40,6 kB92,0 kB [overzicht]
s390x 44,2 kB124,0 kB [overzicht]
sh4 (unofficial port) 47,7 kB143,0 kB [overzicht]
sparc64 (unofficial port) 34,6 kB1.042,0 kB [overzicht]
x32 (unofficial port) 41,1 kB115,0 kB [overzicht]