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[ Bron: lagan  ]

Pakket: lagan (2.0-10)

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highly parametrizable pairwise global genome sequence aligner

Lagan takes local alignments generated by CHAOS as anchors, and limits the search area of the Needleman-Wunsch algorithm around these anchors.

Multi-LAGAN is a generalization of the pairwise algorithm to multiple sequence alignment. M-LAGAN performs progressive pairwise alignments, guided by a user-specified phylogenetic tree. Alignments are aligned to other alignments using the sum-of-pairs metric.

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Platform Pakketgrootte Geïnstalleerde grootte Bestanden
riscv64 180,8 kB682,0 kB [overzicht]