[ Bron: libfastahack ]
Pakket: libfastahack0 (0.0+git20160702.bbc645f+dfsg-6)
Verwijzigingen voor libfastahack0
Debian bronnen:
Het bronpakket libfastahack downloaden:
- [libfastahack_0.0+git20160702.bbc645f+dfsg-6.dsc]
- [libfastahack_0.0+git20160702.bbc645f+dfsg.orig.tar.xz]
- [libfastahack_0.0+git20160702.bbc645f+dfsg-6.debian.tar.xz]
Beheerders:
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
library for indexing and sequence extraction from FASTA files (lib)
fastahack is a small application for indexing and extracting sequences and subsequences from FASTA files. The included Fasta.cpp library provides a FASTA reader and indexer that can be embedded into applications which would benefit from directly reading subsequences from FASTA files. The library automatically handles index file generation and use.
Features:
* FASTA index (.fai) generation for FASTA files * Sequence extraction * Subsequence extraction * Sequence statistics (currently only entropy is provided)
Sequence and subsequence extraction use fseek64 to provide fastest-possible extraction without RAM-intensive file loading operations. This makes fastahack a useful tool for bioinformaticists who need to quickly extract many subsequences from a reference FASTA sequence.
This package contains the dynamic library.
Andere aan libfastahack0 gerelateerde pakketten
|
|
|
|
-
- dep: libc6 (>= 2.14)
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
-
- dep: libgcc1 (>= 1:3.0)
- GCC support bibliotheek
-
- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3