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Pakket: gsort (0.1.4-3 en anderen)

Verwijzigingen voor gsort

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Debian bronnen:

Het bronpakket gsort downloaden:

Beheerders:

Externe bronnen:

Vergelijkbare pakketten:

sort genomic data

gsort is a tool to sort genomic files according to a genomefile. For example, to sort VCF to have order: X, Y, 2, 1, 3, ... and the header needs to be kept at the top.

As a more likely example, if a file nneds to be sorted to match GATK order (1 ... X, Y, MT) which is not possible with any other sorting tool. With gsort one can simply place MT as the last chrom in the ".genome" file.

It will also be useful for getting files ready for use in bedtools.

Andere aan gsort gerelateerde pakketten

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gsort downloaden

Pakket downloaden voor alle beschikbare platforms
Platform Versie Pakketgrootte Geïnstalleerde grootte Bestanden
amd64 0.1.4-3+b6 1.705,1 kB5.379,0 kB [overzicht]
arm64 0.1.4-3+b6 1.454,0 kB4.966,0 kB [overzicht]
armel 0.1.4-3+b6 1.485,7 kB4.613,0 kB [overzicht]
armhf 0.1.4-3+b6 1.480,4 kB4.613,0 kB [overzicht]
i386 0.1.4-3+b6 1.620,6 kB4.579,0 kB [overzicht]
mips64el 0.1.4-3+b6 1.375,7 kB5.457,0 kB [overzicht]
mipsel 0.1.4-3+b6 1.400,7 kB5.105,0 kB [overzicht]
ppc64el 0.1.4-3+b6 1.429,0 kB5.030,0 kB [overzicht]
s390x 0.1.4-3+b6 1.559,0 kB5.289,0 kB [overzicht]