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[ Bron: pbsim  ]

Pakket: pbsim (1.0.3+git20180330.e014b1d+dfsg-2)

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simulator for PacBio sequencing reads

PacBio DNA sequencers produce two types of characteristic reads: CCS (short and low error rate) and CLR (long and high error rate), both of which could be useful for de novo assembly of genomes. PBSIM simulates those PacBio reads from a reference sequence by using either a model-based or sampling-based simulation. Simulated reads are useful, for example, when developing or evaluating sequence assemblers targeted at PacBio data.

Tags: Biology: Nucleic Acids, Field: Biology, field::biology:bioinformatics, implemented-in::c++, Role: Program, Purpose: use::simulating, works-with::biological-sequence

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pbsim downloaden

Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
amd64 25,0 kB97,0 kB [overzicht]
arm64 24,2 kB93,0 kB [overzicht]
armel 24,6 kB92,0 kB [overzicht]
armhf 24,1 kB84,0 kB [overzicht]
i386 26,0 kB100,0 kB [overzicht]
mips64el 25,5 kB99,0 kB [overzicht]
mipsel 26,0 kB98,0 kB [overzicht]
ppc64el 26,7 kB121,0 kB [overzicht]
s390x 23,7 kB93,0 kB [overzicht]