Pakket: ltrsift (1.0.2-9)

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Homepage [www.zbh.uni-hamburg.de]

Vergelijkbare pakketten:

postprocessing and classification of LTR retrotransposons

LTRsift is a graphical desktop tool for semi-automatic postprocessing of de novo predicted LTR retrotransposon annotations, such as the ones generated by LTRharvest and LTRdigest. Its user-friendly interface displays LTR retrotransposon candidates, their putative families and their internal structure in a hierarchical fashion, allowing the user to "sift" through the sometimes large results of de novo prediction software. It also offers customizable filtering and classification functionality.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, User Interface: Graphical User Interface, interface::x11, role::program, Scope: Utility, Interface Toolkit: GTK, Purpose: use::analysing, use::browsing, Comparing, Data Organisation, use::viewing, x11::application

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depends

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dep: libc6 (>= 2.17) [arm64, ppc64el]

GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb

dep: libc6 (>= 2.7) [niet arm64, ppc64el]
dep: libcairo2 (>= 1.2.4)

Cairo 2D vector graphics library
dep: libgdk-pixbuf2.0-0 (>= 2.22.0)

GDK Pixbuf library (transitional package)
dep: libgenometools0 (>= 1.6.1+ds)

versatile genome analysis library
dep: libglib2.0-0 (>= 2.35.9)

GLib library of C routines
dep: libgtk2.0-0 (>= 2.18.0)

GTK graphical user interface library - old version
dep: libpango-1.0-0 (>= 1.14.0)

Layout and rendering of internationalized text

rec: last-align

genome-scale comparison of biological sequences
rec: ncbi-blast+

next generation suite of BLAST sequence search tools

ltrsift downloaden

Pakket downloaden voor alle beschikbare platforms
Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	106,8 kB	377,0 kB	[overzicht]
arm64	96,1 kB	357,0 kB	[overzicht]
armel	93,7 kB	327,0 kB	[overzicht]
armhf	95,2 kB	279,0 kB	[overzicht]
i386	118,4 kB	439,0 kB	[overzicht]
mips64el	87,6 kB	405,0 kB	[overzicht]
mipsel	90,8 kB	416,0 kB	[overzicht]
ppc64el	106,2 kB	513,0 kB	[overzicht]
s390x	96,1 kB	381,0 kB	[overzicht]