[ Bron: cyvcf2 ]
Pakket: python3-cyvcf2 (0.30.18-1 en anderen)
Verwijzigingen voor python3-cyvcf2
Debian bronnen:
Het bronpakket cyvcf2 downloaden:
Beheerders:
- Debian Med Packaging Team (QA-pagina, Mailarchief)
- Steffen Moeller (QA-pagina)
- Liubov Chuprikova (QA-pagina)
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
VCF parser based on htslib (Python 3)
This modules allows fast parsing of VCF and BCF including region-queries with Python. This is essential for efficient analyses of nucleotide variation with Python on high-throughput sequencing data.
cyvcf2 is a cython wrapper around htslib. Attributes like variant.gt_ref_depths return a numpy array directly so they are immediately ready for downstream use.
This package installs the library for Python 3.
Andere aan python3-cyvcf2 gerelateerde pakketten
|
|
|
|
-
- dep: libc6 (>= 2.14) [amd64]
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
- dep: libc6 (>= 2.17) [arm64, ppc64el]
- dep: libc6 (>= 2.7) [niet amd64, arm64, ppc64el]
-
- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (<< 3.12)
- dep: python3 (>= 3.11~)
-
- dep: python3-click
- Wrapper around optparse for command line utilities - Python 3.x
-
- dep: python3-coloredlogs
- colored terminal output for Python 3's logging module
-
- dep: python3-numpy (>= 1:1.22.0)
- Fast array facility to the Python 3 language
-
- dep: python3-numpy-abi9
- virtueel pakket geboden door python3-numpy
python3-cyvcf2 downloaden
| Platform | Versie | Pakketgrootte | Geïnstalleerde grootte | Bestanden |
|---|---|---|---|---|
| amd64 | 0.30.18-1+b2 | 783,8 kB | 4.710,0 kB | [overzicht] |
| arm64 | 0.30.18-1+b2 | 755,0 kB | 4.725,0 kB | [overzicht] |
| armel | 0.30.18-1+b2 | 753,1 kB | 4.624,0 kB | [overzicht] |
| armhf | 0.30.18-1+b2 | 754,1 kB | 4.452,0 kB | [overzicht] |
| i386 | 0.30.18-1+b2 | 782,4 kB | 4.726,0 kB | [overzicht] |
| mips64el | 0.30.18-1+b2 | 735,7 kB | 4.740,0 kB | [overzicht] |
| mipsel | 0.30.18-1+b2 | 735,5 kB | 4.719,0 kB | [overzicht] |
| ppc64el | 0.30.18-1+b2 | 778,0 kB | 4.853,0 kB | [overzicht] |
| s390x | 0.30.18-1+b2 | 745,3 kB | 4.708,0 kB | [overzicht] |