Pakket: concavity (0.1+dfsg.1-5)

Verwijzigingen voor concavity

Debian bronnen:

Het bronpakket concavity downloaden:

Beheerders:

Externe bronnen:

Homepage [compbio.cs.princeton.edu]

Vergelijkbare pakketten:

predictor of protein ligand binding sites from structure and conservation

ConCavity predicts protein ligand binding sites by combining evolutionary sequence conservation and 3D structure.

ConCavity takes as input a PDB format protein structure and optionally files that characterize the evolutionary sequence conservation of the chains in the structure file.

The following result files are produced by default:

 * Residue ligand binding predictions for each chain (*.scores).
 * Residue ligand binding predictions in a PDB format file (residue
   scores placed in the temp. factor field, *_residue.pdb).
 * Pocket prediction locations in a DX format file (*.dx).
 * PyMOL script to visualize the predictions (*.pml).

Andere aan concavity gerelateerde pakketten

depends

recommends

suggests

enhances

dep: libc6 (>= 2.29)

GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
dep: libgcc-s1 (>= 3.5)

GCC support bibliotheek
dep: libstdc++6 (>= 5)

GNU Standard C++ Library v3

sug: conservation-code

protein sequence conservation scoring tool
sug: pymol

Molecular Graphics System

concavity downloaden

Pakket downloaden voor alle beschikbare platforms
Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
armhf	222,9 kB	809,0 kB	[overzicht]