Package: eigensoft (7.2.1+dfsg-2)

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reduction of population bias for genetic analyses

The EIGENSOFT package combines functionality from the group's population genetics methods (Patterson et al. 2006) and their EIGENSTRAT stratification method (Price et al. 2006). The EIGENSTRAT method uses principal components analysis to explicitly model ancestry differences between cases and controls along continuous axes of variation; the resulting correction is specific to a candidate marker's variation in frequency across ancestral populations, minimizing spurious associations while maximizing power to detect true associations. The EIGENSOFT package has a built-in plotting script and supports multiple file formats and quantitative phenotypes.

Other Packages Related to eigensoft

depends

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dep: libblas3

기본 선형 대수 참조 구현, 공유 라이브러리

or libblas.so.3

virtual package provided by libatlas3-base, libblas3, libblis3-openmp, libblis3-pthread, libblis3-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
dep: libc6 (>= 2.29)

GNU C 라이브러리: 공유 라이브러리
also a virtual package provided by libc6-udeb
dep: libgsl25 (>= 2.6)

GNU Scientific Library (GSL) -- library package
dep: liblapack3

선형 대수 루틴 3 라이브러리 - 공유 버젼

or liblapack.so.3

virtual package provided by libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
dep: liblapacke (>= 3.9.0)

Library of linear algebra routines 3 - C lib shared version
dep: perl

래리 월의 Practical Extraction and Report Language

rec: gnuplot

Command-line driven interactive plotting program.
also a virtual package provided by gnuplot-nox, gnuplot-qt, gnuplot-x11

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Architecture	Package Size	Installed Size	Files
ppc64el	363.7 kB	3,843.0 kB	[list of files]