[ ソース: busco ]
パッケージ: busco (5.5.0-2)
benchmarking sets of universal single-copy orthologs
Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs (BUSCO).
* Automated selection of lineages issued from https://www.orthodb.org/ * Automated download of all necessary files and datasets to conduct a run * Use prodigal for non-eukaryotic genomes
その他の busco 関連パッケージ
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- dep: bbmap
- BBTools genomic aligner and other tools for short sequences
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- dep: hmmer
- タンパク質配列解析用のプロファイル隠れマルコフモデル
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- dep: prodigal
- Microbial (bacterial and archaeal) gene finding program
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- dep: python3
- 対話式の高レベルオブジェクト指向言語 (デフォルト python3 バージョン)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-pandas
- data structures for "relational" or "labeled" data