パッケージ: rapmap-dev (0.15.0+dfsg-4)
rapmap - rapid sensitive and accurate DNA read mapping (some headers)
RapMap is a testing ground for ideas in quasi-mapping / (lightweight / pseudo) transcriptome alignment. That means that, at this point, it is somewhat experimental. The develop branch will have the latest improvements and additions, but is not guaranteed to be stable between commits. Breaking changes to the master branch will be accompanied by a tag to the version before the breaking change. Currently, RapMap is a stand-alone quasi-mapper that can be used with other tools. It is also being used as part of Sailfish and Salmon. Eventually, the hope is to create and stabilize an API so that it can be used as a library from other tools.
This package contains some headers and C++ source files which are included by package salmon and are provided here in an accessible way to avoid code duplication. Usually there is no reason to install this package except to build the salmon package.