[ ソース: garli ]
パッケージ: garli-mpi (2.1-4)
phylogenetic analysis of molecular sequence data using maximum-likelihood (MPI)
GARLI, Genetic Algorithm for Rapid Likelihood Inference is a program for inferring phylogenetic trees. Using an approach similar to a classical genetic algorithm, it rapidly searches the space of evolutionary trees and model parameters to find the solution maximizing the likelihood score. It implements nucleotide, amino acid and codon-based models of sequence evolution, and runs on all platforms. The latest version adds support for partitioned models and morphology-like datatypes.
This version of Garli is using MPI.
その他の garli-mpi 関連パッケージ
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- dep: libc6 (>= 2.29)
- GNU C ライブラリ: 共有ライブラリ
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC 共有ライブラリ
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- dep: libncl2 (>= 2.1.21+git20190531.feceb81)
- NEXUS Class Library
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- dep: libopenmpi3 (>= 4.0.5)
- high performance message passing library -- shared library
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- dep: libstdc++6 (>= 9)
- GNU 標準 C++ ライブラリ v3
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- dep: openmpi-bin
- high performance message passing library -- binaries