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/usr/bin/2ft
/usr/bin/6ft
/usr/bin/compare_2_profiles.pl
/usr/bin/fasta_to_fastq.pl
/usr/bin/make_iupac_cmp.pl
/usr/bin/pfcalibrateV3
/usr/bin/pfdump
/usr/bin/pfemit
/usr/bin/pfgtop
/usr/bin/pfhtop
/usr/bin/pfindex
/usr/bin/pfmake
/usr/bin/pfpam
/usr/bin/pfscale
/usr/bin/pfscan
/usr/bin/pfscanV3
/usr/bin/pfsearch
/usr/bin/pfsearchV3
/usr/bin/pfw
/usr/bin/ps_scan.pl
/usr/bin/psa2msa
/usr/bin/ptof
/usr/bin/ptoh
/usr/bin/scramble_fasta.pl
/usr/bin/sort_fasta.pl
/usr/bin/split_profile_file.pl
/usr/share/data/calibration/reversed.seq
/usr/share/data/calibration/window20.seq
/usr/share/data/cmp/blosum100.cmp
/usr/share/data/cmp/blosum30.cmp
/usr/share/data/cmp/blosum45.cmp
/usr/share/data/cmp/blosum50.cmp
/usr/share/data/cmp/blosum62.cmp
/usr/share/data/cmp/blosum65.cmp
/usr/share/data/cmp/blosum80.cmp
/usr/share/data/cmp/dna_50_40.cmp
/usr/share/data/cmp/gonnet.cmp
/usr/share/data/cmp/iupac_50_40.cmp
/usr/share/data/cmp/pam120.cmp
/usr/share/data/cmp/pam160.cmp
/usr/share/data/cmp/pam200.cmp
/usr/share/data/cmp/pam220.cmp
/usr/share/data/cmp/pam250.cmp
/usr/share/data/cmp/pam30.cmp
/usr/share/data/cmp/pam40.cmp
/usr/share/data/cmp/pam400.cmp
/usr/share/data/cmp/pam80.cmp
/usr/share/data/familyProfile/DoubleProfile.prf
/usr/share/data/familyProfile/sequence.seq
/usr/share/data/familyProfile/sh2.prf
/usr/share/data/reverse/forward.msa
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/usr/share/data/reverse/forward.seq
/usr/share/data/reverse/forward_dna.seq
/usr/share/data/reverse/forward_dna_shift5.seq
/usr/share/data/reverse/reverse.msa
/usr/share/data/reverse/reverse.prf
/usr/share/data/reverse/reverse.seq
/usr/share/doc/pftools/README.Debian
/usr/share/doc/pftools/README.md.gz
/usr/share/doc/pftools/README.pftools.v2.3.md.gz
/usr/share/doc/pftools/README.test
/usr/share/doc/pftools/btt129.pdf.gz
/usr/share/doc/pftools/changelog.Debian.gz
/usr/share/doc/pftools/copyright
/usr/share/doc/pftools/examples/CMakeLists.txt
/usr/share/doc/pftools/examples/Calibration/reversed.seq
/usr/share/doc/pftools/examples/Calibration/window20.seq
/usr/share/doc/pftools/examples/FamilyProfile/DoubleProfile.prf
/usr/share/doc/pftools/examples/FamilyProfile/sequence.seq
/usr/share/doc/pftools/examples/FamilyProfile/sh2.prf
/usr/share/doc/pftools/examples/Matrices/blosum100.cmp
/usr/share/doc/pftools/examples/Matrices/blosum30.cmp
/usr/share/doc/pftools/examples/Matrices/blosum45.cmp
/usr/share/doc/pftools/examples/Matrices/blosum50.cmp
/usr/share/doc/pftools/examples/Matrices/blosum62.cmp
/usr/share/doc/pftools/examples/Matrices/blosum65.cmp
/usr/share/doc/pftools/examples/Matrices/blosum80.cmp
/usr/share/doc/pftools/examples/Matrices/dna_50_40.cmp
/usr/share/doc/pftools/examples/Matrices/gonnet.cmp
/usr/share/doc/pftools/examples/Matrices/iupac_50_40.cmp
/usr/share/doc/pftools/examples/Matrices/pam120.cmp
/usr/share/doc/pftools/examples/Matrices/pam160.cmp
/usr/share/doc/pftools/examples/Matrices/pam200.cmp
/usr/share/doc/pftools/examples/Matrices/pam220.cmp
/usr/share/doc/pftools/examples/Matrices/pam250.cmp
/usr/share/doc/pftools/examples/Matrices/pam30.cmp
/usr/share/doc/pftools/examples/Matrices/pam40.cmp
/usr/share/doc/pftools/examples/Matrices/pam400.cmp
/usr/share/doc/pftools/examples/Matrices/pam80.cmp
/usr/share/doc/pftools/examples/reverse/forward.msa
/usr/share/doc/pftools/examples/reverse/forward.prf
/usr/share/doc/pftools/examples/reverse/forward.seq
/usr/share/doc/pftools/examples/reverse/forward_dna.seq
/usr/share/doc/pftools/examples/reverse/forward_dna_shift5.seq
/usr/share/doc/pftools/examples/reverse/reverse.msa
/usr/share/doc/pftools/examples/reverse/reverse.prf
/usr/share/doc/pftools/examples/reverse/reverse.seq
/usr/share/doc/pftools/examples/test.build
/usr/share/doc/pftools/examples/test.compare
/usr/share/doc/pftools/posterPfsearchV3SIBdays2013_v0.3.pdf.gz
/usr/share/doc/pftools/profile.pdf.gz
/usr/share/doc/pftools/profile.txt.gz
/usr/share/doc/pftools/run-unit-test
/usr/share/examples/16S.prf
/usr/share/examples/CVPBR322.embl
/usr/share/examples/GTPA_HUMAN.dat
/usr/share/examples/MYSA_HUMAN
/usr/share/examples/PS00741_PS50010.dat
/usr/share/examples/R76849.seq
/usr/share/examples/RF00177.msa
/usr/share/examples/SRR9619541.sample.fastq
/usr/share/examples/Toolbox.pm
/usr/share/examples/VAV_HUMAN.seq
/usr/share/examples/VAV_RAT.seq
/usr/share/examples/all.prf
/usr/share/examples/all.seq
/usr/share/examples/coils.prf
/usr/share/examples/ecp.prf
/usr/share/examples/hiv.fastq
/usr/share/examples/hiv.prf
/usr/share/examples/htop_issue.hmm
/usr/share/examples/pfam_sh3.hmm
/usr/share/examples/prosite13.prf
/usr/share/examples/rand_dna.prf
/usr/share/examples/rand_dna.seq
/usr/share/examples/sample.fastq
/usr/share/examples/score.lis
/usr/share/examples/sh2.prf
/usr/share/examples/sh3.gpr
/usr/share/examples/sh3.msf
/usr/share/examples/sh3.prf
/usr/share/examples/sh3.seq
/usr/share/examples/standard.random
/usr/share/examples/test_V2.sh
/usr/share/examples/test_V3.out
/usr/share/examples/test_V3.sh
/usr/share/examples/test_V3_output.sh.cmake
/usr/share/examples/test_pfsearchV3_iupac.pl
/usr/share/examples/test_scan_search.pl
/usr/share/lintian/overrides/pftools
/usr/share/man/man1/2ft.1.gz
/usr/share/man/man1/6ft.1.gz
/usr/share/man/man1/pfdump.1.gz
/usr/share/man/man1/pfgtop.1.gz
/usr/share/man/man1/pfhtop.1.gz
/usr/share/man/man1/pfmake.1.gz
/usr/share/man/man1/pfscale.1.gz
/usr/share/man/man1/pfscan.1.gz
/usr/share/man/man1/pfsearch.1.gz
/usr/share/man/man1/pfsearchV2.1.gz
/usr/share/man/man1/pfsearchV3.1.gz
/usr/share/man/man1/pfw.1.gz
/usr/share/man/man1/psa2msa.1.gz
/usr/share/man/man1/ptof.1.gz
/usr/share/man/man1/ptoh.1.gz
/usr/share/man/man5/psa.5.gz
/usr/share/man/man5/xpsa.5.gz