Package: libbifrost-dev (1.3.1-1 and others)

Links for libbifrost-dev

Debian Resources:

Download Source Package bifrost:

Maintainers:

External Resources:

Homepage [github.com]

Similar packages:

static library and header files for libbifrost

Libbifrost-dev is the development library for the command-line tool bifrost for sequencing that features a broad range of functions, such as indexing, editing, and querying the graph, and includes a graph coloring method that maps each k-mer of the graph to the genomes it occurs in.

 * Build, index, color and query the compacted de Bruijn graph
 * No need to build the uncompacted de Bruijn graph
 * Reads or assembled genomes as input
 * Output graph in GFA (can be visualized with Bandage), FASTA or binary
 * Graph cleaning: short tip clipping, etc.
 * Multi-threaded
 * No parameters to estimate with other tools
 * Exact or approximate k-mer search of queries

Other Packages Related to libbifrost-dev

depends

recommends

suggests

enhances

dep: libbifrost0 (= 1.3.1-1) [not arm64]

library for parallel construction, indexing and querying of de Bruijn graphs

dep: libbifrost0 (= 1.3.1-1+b1) [arm64]

Download libbifrost-dev

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	1.3.1-1	637.5 kB	5,213.0 kB	[list of files]
amd64	1.3.1-1	588.8 kB	3,858.0 kB	[list of files]
arm64	1.3.1-1+b1	576.0 kB	3,803.0 kB	[list of files]
ia64 (unofficial port)	1.3.1-1	727.4 kB	5,395.0 kB	[list of files]
mips64el	1.3.1-1	612.3 kB	4,463.0 kB	[list of files]
ppc64 (unofficial port)	1.3.1-1	603.5 kB	4,167.0 kB	[list of files]
ppc64el	1.3.1-1	619.4 kB	4,138.0 kB	[list of files]
riscv64	1.3.1-1	1,790.5 kB	18,705.0 kB	[list of files]
s390x	1.3.1-1	610.5 kB	4,019.0 kB	[list of files]
sparc64 (unofficial port)	1.3.1-1	536.7 kB	3,889.0 kB	[list of files]